Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HLA-DQA1Q5Y7H0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HLA-DQA1Q5Y7H0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DQA1Q5Y7H0 AF213884.3-201ENST00000563833 479 ntBASIC20.38■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC126544.1-201ENST00000580842 1059 ntBASIC20.38■□□□□ 0.85
HLA-DQA1Q5Y7H0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DQA1Q5Y7H0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC010525.1-201ENST00000585559 441 ntBASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC087239.1-201ENST00000622671 572 ntBASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HLA-DQA1Q5Y7H0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC099791.1-201ENST00000416440 715 ntBASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 AP001330.3-201ENST00000520123 633 ntBASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC068587.7-201ENST00000641602 218 ntBASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.36■□□□□ 0.85
HLA-DQA1Q5Y7H0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
HLA-DQA1Q5Y7H0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 MIR939-201ENST00000401314 82 ntBASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC091305.1-201ENST00000479476 895 ntBASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 LINC01960-201ENST00000563759 1884 ntBASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 RASA4CP-201ENST00000424092 1398 ntBASIC20.34■□□□□ 0.85
HLA-DQA1Q5Y7H0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HLA-DQA1Q5Y7H0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.33■□□□□ 0.84
HLA-DQA1Q5Y7H0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQA1Q5Y7H0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQA1Q5Y7H0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQA1Q5Y7H0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HLA-DQA1Q5Y7H0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DQA1Q5Y7H0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms