Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF17Q5VTA0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF17Q5VTA0 AC105233.4-201ENST00000642045 216 ntBASIC20.88■□□□□ 0.93
PRAMEF17Q5VTA0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF17Q5VTA0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRAMEF17Q5VTA0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.88■□□□□ 0.93
PRAMEF17Q5VTA0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 AC034268.1-201ENST00000441047 882 ntBASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.87■□□□□ 0.93
PRAMEF17Q5VTA0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.86■□□□□ 0.93
PRAMEF17Q5VTA0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 AC092068.2-201ENST00000590491 1708 ntBASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 CCDC92B-201ENST00000575506 885 ntBASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PRAMEF17Q5VTA0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRAMEF17Q5VTA0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 KRT18P5-201ENST00000436075 1291 ntBASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 AC123595.1-201ENST00000440769 1046 ntBASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.83■□□□□ 0.93
PRAMEF17Q5VTA0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
PRAMEF17Q5VTA0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRAMEF17Q5VTA0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
PRAMEF17Q5VTA0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.82■□□□□ 0.92
PRAMEF17Q5VTA0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF17Q5VTA0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF17Q5VTA0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF17Q5VTA0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF17Q5VTA0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF17Q5VTA0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.82■□□□□ 0.92
PRAMEF17Q5VTA0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRAMEF17Q5VTA0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.81■□□□□ 0.92
PRAMEF17Q5VTA0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PRAMEF17Q5VTA0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF17Q5VTA0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.81■□□□□ 0.92
PRAMEF17Q5VTA0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PRAMEF17Q5VTA0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF17Q5VTA0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF17Q5VTA0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRAMEF17Q5VTA0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms