Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CBWD3Q5JTY5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CBWD3Q5JTY5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CBWD3Q5JTY5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.75■■□□□ 1.39
CBWD3Q5JTY5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CBWD3Q5JTY5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CBWD3Q5JTY5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 AC137767.1-201ENST00000602918 1920 ntBASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CBWD3Q5JTY5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.73■■□□□ 1.39
CBWD3Q5JTY5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 DUX4L19-201ENST00000557448 1267 ntBASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 AL138724.1-201ENST00000606771 1088 ntBASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 AL031602.1-201ENST00000633169 911 ntBASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CBWD3Q5JTY5 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 AC010525.1-201ENST00000585559 441 ntBASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CBWD3Q5JTY5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 OR2I1P-207ENST00000453522 948 ntBASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 CA15P2-201ENST00000611168 834 ntBASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CBWD3Q5JTY5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 AC008406.3-201ENST00000620001 1374 ntBASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 AC011298.3-201ENST00000615796 283 ntBASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 AC136469.2-201ENST00000623944 1028 ntBASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CBWD3Q5JTY5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CBWD3Q5JTY5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CBWD3Q5JTY5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms