Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 pRNA.6-201ENST00000610482 90 ntBASIC20.92■□□□□ 0.94
SPIN4Q56A73 CA15P2-201ENST00000611168 834 ntBASIC20.92■□□□□ 0.94
SPIN4Q56A73 pRNA.5-201ENST00000612139 90 ntBASIC20.92■□□□□ 0.94
SPIN4Q56A73 pRNA.11-201ENST00000618423 90 ntBASIC20.92■□□□□ 0.94
SPIN4Q56A73 pRNA.13-201ENST00000619112 90 ntBASIC20.92■□□□□ 0.94
SPIN4Q56A73 AC133637.1-201ENST00000624115 1537 ntBASIC20.92■□□□□ 0.94
SPIN4Q56A73 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPIN4Q56A73 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SPIN4Q56A73 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.92■□□□□ 0.94
SPIN4Q56A73 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SPIN4Q56A73 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPIN4Q56A73 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPIN4Q56A73 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPIN4Q56A73 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SPIN4Q56A73 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.91■□□□□ 0.94
SPIN4Q56A73 AC006455.2-201ENST00000429931 906 ntBASIC20.91■□□□□ 0.94
SPIN4Q56A73 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SPIN4Q56A73 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.91■□□□□ 0.94
SPIN4Q56A73 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPIN4Q56A73 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.9■□□□□ 0.94
SPIN4Q56A73 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPIN4Q56A73 AC137767.1-201ENST00000602918 1920 ntBASIC20.9■□□□□ 0.94
SPIN4Q56A73 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPIN4Q56A73 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SPIN4Q56A73 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPIN4Q56A73 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.9■□□□□ 0.94
SPIN4Q56A73 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.9■□□□□ 0.94
SPIN4Q56A73 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPIN4Q56A73 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPIN4Q56A73 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPIN4Q56A73 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SPIN4Q56A73 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPIN4Q56A73 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
SPIN4Q56A73 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.89■□□□□ 0.93
SPIN4Q56A73 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.89■□□□□ 0.93
SPIN4Q56A73 AL512631.2-201ENST00000604634 923 ntBASIC20.89■□□□□ 0.93
SPIN4Q56A73 C11orf96-202ENST00000528572 1834 ntBASIC20.89■□□□□ 0.93
SPIN4Q56A73 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPIN4Q56A73 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.89■□□□□ 0.93
SPIN4Q56A73 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPIN4Q56A73 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.89■□□□□ 0.93
SPIN4Q56A73 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPIN4Q56A73 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPIN4Q56A73 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPIN4Q56A73 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPIN4Q56A73 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.88■□□□□ 0.93
SPIN4Q56A73 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPIN4Q56A73 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.88■□□□□ 0.93
SPIN4Q56A73 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPIN4Q56A73 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPIN4Q56A73 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPIN4Q56A73 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPIN4Q56A73 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPIN4Q56A73 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPIN4Q56A73 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPIN4Q56A73 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPIN4Q56A73 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPIN4Q56A73 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPIN4Q56A73 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SPIN4Q56A73 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPIN4Q56A73 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.86■□□□□ 0.93
SPIN4Q56A73 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.86■□□□□ 0.93
SPIN4Q56A73 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.86■□□□□ 0.93
SPIN4Q56A73 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.86■□□□□ 0.93
SPIN4Q56A73 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
SPIN4Q56A73 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPIN4Q56A73 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPIN4Q56A73 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SPIN4Q56A73 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPIN4Q56A73 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.85■□□□□ 0.93
SPIN4Q56A73 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPIN4Q56A73 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms