Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3BQ53EP0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 AC022517.1-201ENST00000592429 346 ntBASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 AC092068.2-201ENST00000590491 1708 ntBASIC22.23■■□□□ 1.15
FNDC3BQ53EP0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 NTF6G-201ENST00000591094 616 ntBASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3BQ53EP0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 IKBKGP1-201ENST00000612193 1073 ntBASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
FNDC3BQ53EP0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.2■■□□□ 1.15
FNDC3BQ53EP0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
FNDC3BQ53EP0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
FNDC3BQ53EP0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FNDC3BQ53EP0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FNDC3BQ53EP0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 OXCT2P1-201ENST00000447263 1535 ntBASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 SMUG1P1-201ENST00000590640 811 ntBASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 AL137784.2-201ENST00000607332 1000 ntBASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
FNDC3BQ53EP0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
FNDC3BQ53EP0 BX005040.4-201ENST00000637145 1518 ntBASIC22.17■■□□□ 1.14
FNDC3BQ53EP0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FNDC3BQ53EP0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
FNDC3BQ53EP0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.17■■□□□ 1.14
FNDC3BQ53EP0 DUSP8P3-201ENST00000399571 1760 ntBASIC22.17■■□□□ 1.14
FNDC3BQ53EP0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
FNDC3BQ53EP0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
FNDC3BQ53EP0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms