Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
USH1GQ495M9 AC068587.7-201ENST00000641602 218 ntBASIC25.22■■□□□ 1.63
USH1GQ495M9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.22■■□□□ 1.63
USH1GQ495M9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
USH1GQ495M9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
USH1GQ495M9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.22■■□□□ 1.63
USH1GQ495M9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.21■■□□□ 1.63
USH1GQ495M9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
USH1GQ495M9 DUSP8P3-201ENST00000399571 1760 ntBASIC25.21■■□□□ 1.63
USH1GQ495M9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.21■■□□□ 1.63
USH1GQ495M9 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.21■■□□□ 1.63
USH1GQ495M9 AC010141.3-201ENST00000456659 717 ntBASIC25.21■■□□□ 1.63
USH1GQ495M9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.21■■□□□ 1.63
USH1GQ495M9 AC104564.3-201ENST00000582367 638 ntBASIC25.21■■□□□ 1.63
USH1GQ495M9 AC087239.1-201ENST00000622671 572 ntBASIC25.21■■□□□ 1.63
USH1GQ495M9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
USH1GQ495M9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
USH1GQ495M9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.2■■□□□ 1.63
USH1GQ495M9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
USH1GQ495M9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.2■■□□□ 1.62
USH1GQ495M9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
USH1GQ495M9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.2■■□□□ 1.62
USH1GQ495M9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
USH1GQ495M9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.2■■□□□ 1.62
USH1GQ495M9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
USH1GQ495M9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.19■■□□□ 1.62
USH1GQ495M9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
USH1GQ495M9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.19■■□□□ 1.62
USH1GQ495M9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.19■■□□□ 1.62
USH1GQ495M9 AC123595.1-201ENST00000440769 1046 ntBASIC25.19■■□□□ 1.62
USH1GQ495M9 AC034268.1-201ENST00000441047 882 ntBASIC25.19■■□□□ 1.62
USH1GQ495M9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
USH1GQ495M9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
USH1GQ495M9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
USH1GQ495M9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
USH1GQ495M9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
USH1GQ495M9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
USH1GQ495M9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
USH1GQ495M9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.19■■□□□ 1.62
USH1GQ495M9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.19■■□□□ 1.62
USH1GQ495M9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.18■■□□□ 1.62
USH1GQ495M9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
USH1GQ495M9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
USH1GQ495M9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.18■■□□□ 1.62
USH1GQ495M9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.18■■□□□ 1.62
USH1GQ495M9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
USH1GQ495M9 DUX4L2-201ENST00000561772 1275 ntBASIC25.18■■□□□ 1.62
USH1GQ495M9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.18■■□□□ 1.62
USH1GQ495M9 DUX4L6-201ENST00000626483 1275 ntBASIC25.18■■□□□ 1.62
USH1GQ495M9 DUX4L1-201ENST00000627662 1275 ntBASIC25.18■■□□□ 1.62
USH1GQ495M9 DUX4L8-201ENST00000629013 1275 ntBASIC25.18■■□□□ 1.62
USH1GQ495M9 DUX4L3-201ENST00000630187 1275 ntBASIC25.18■■□□□ 1.62
USH1GQ495M9 DUX4L7-201ENST00000630678 1275 ntBASIC25.18■■□□□ 1.62
USH1GQ495M9 DUX4L5-201ENST00000630834 1275 ntBASIC25.18■■□□□ 1.62
USH1GQ495M9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.18■■□□□ 1.62
USH1GQ495M9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
USH1GQ495M9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
USH1GQ495M9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.17■■□□□ 1.62
USH1GQ495M9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
USH1GQ495M9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
USH1GQ495M9 CCDC92B-201ENST00000575506 885 ntBASIC25.17■■□□□ 1.62
USH1GQ495M9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.17■■□□□ 1.62
USH1GQ495M9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
USH1GQ495M9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
USH1GQ495M9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.17■■□□□ 1.62
USH1GQ495M9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
USH1GQ495M9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
USH1GQ495M9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
USH1GQ495M9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
USH1GQ495M9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
USH1GQ495M9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
USH1GQ495M9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
USH1GQ495M9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.16■■□□□ 1.62
USH1GQ495M9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.16■■□□□ 1.62
USH1GQ495M9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
USH1GQ495M9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
USH1GQ495M9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.16■■□□□ 1.62
USH1GQ495M9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
USH1GQ495M9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.15■■□□□ 1.62
USH1GQ495M9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.15■■□□□ 1.62
USH1GQ495M9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
USH1GQ495M9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
USH1GQ495M9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
USH1GQ495M9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.15■■□□□ 1.62
USH1GQ495M9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
USH1GQ495M9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
USH1GQ495M9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
USH1GQ495M9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
USH1GQ495M9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.14■■□□□ 1.62
USH1GQ495M9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
USH1GQ495M9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms