Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.13■□□□□ 0.33
CFHR3Q02985 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR3Q02985 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR3Q02985 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR3Q02985 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR3Q02985 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR3Q02985 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CFHR3Q02985 MIR572-201ENST00000384983 95 ntBASIC17.13■□□□□ 0.33
CFHR3Q02985 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR3Q02985 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.13■□□□□ 0.33
CFHR3Q02985 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CFHR3Q02985 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.13■□□□□ 0.33
CFHR3Q02985 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CFHR3Q02985 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.13■□□□□ 0.33
CFHR3Q02985 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.13■□□□□ 0.33
CFHR3Q02985 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR3Q02985 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.13■□□□□ 0.33
CFHR3Q02985 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CFHR3Q02985 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CFHR3Q02985 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR3Q02985 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR3Q02985 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CFHR3Q02985 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CFHR3Q02985 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR3Q02985 AC010141.3-201ENST00000456659 717 ntBASIC17.12■□□□□ 0.33
CFHR3Q02985 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.12■□□□□ 0.33
CFHR3Q02985 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR3Q02985 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.12■□□□□ 0.33
CFHR3Q02985 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR3Q02985 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CFHR3Q02985 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR3Q02985 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CFHR3Q02985 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CFHR3Q02985 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR3Q02985 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR3Q02985 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.11■□□□□ 0.33
CFHR3Q02985 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.11■□□□□ 0.33
CFHR3Q02985 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR3Q02985 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.11■□□□□ 0.33
CFHR3Q02985 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.11■□□□□ 0.33
CFHR3Q02985 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.11■□□□□ 0.33
CFHR3Q02985 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.11■□□□□ 0.33
CFHR3Q02985 AC087239.1-201ENST00000622671 572 ntBASIC17.11■□□□□ 0.33
CFHR3Q02985 LINC01960-201ENST00000563759 1884 ntBASIC17.11■□□□□ 0.33
CFHR3Q02985 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR3Q02985 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CFHR3Q02985 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.1■□□□□ 0.33
CFHR3Q02985 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CFHR3Q02985 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CFHR3Q02985 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CFHR3Q02985 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.09■□□□□ 0.33
CFHR3Q02985 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR3Q02985 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR3Q02985 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.09■□□□□ 0.33
CFHR3Q02985 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR3Q02985 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CFHR3Q02985 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR3Q02985 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.09■□□□□ 0.33
CFHR3Q02985 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR3Q02985 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.09■□□□□ 0.33
CFHR3Q02985 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.09■□□□□ 0.33
CFHR3Q02985 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR3Q02985 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR3Q02985 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CFHR3Q02985 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.09■□□□□ 0.33
CFHR3Q02985 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.09■□□□□ 0.33
CFHR3Q02985 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CFHR3Q02985 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.08■□□□□ 0.33
CFHR3Q02985 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CFHR3Q02985 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CFHR3Q02985 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.08■□□□□ 0.32
CFHR3Q02985 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFHR3Q02985 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CFHR3Q02985 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.08■□□□□ 0.32
CFHR3Q02985 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.08■□□□□ 0.32
CFHR3Q02985 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.08■□□□□ 0.32
CFHR3Q02985 AL358852.1-201ENST00000623174 1268 ntBASIC17.08■□□□□ 0.32
CFHR3Q02985 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFHR3Q02985 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CFHR3Q02985 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFHR3Q02985 OXCT2P1-201ENST00000447263 1535 ntBASIC17.07■□□□□ 0.32
CFHR3Q02985 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CFHR3Q02985 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFHR3Q02985 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.07■□□□□ 0.32
CFHR3Q02985 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CFHR3Q02985 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.07■□□□□ 0.32
CFHR3Q02985 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.07■□□□□ 0.32
CFHR3Q02985 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.07■□□□□ 0.32
CFHR3Q02985 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CFHR3Q02985 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.07■□□□□ 0.32
CFHR3Q02985 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CFHR3Q02985 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms