Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 BSD2YBR290W 966 nt4.93□□□□□ -1.62
SSL2Q00578 MCM2YBL023C 2607 nt4.93□□□□□ -1.62
SSL2Q00578 YMR221CYMR221C 1515 nt4.92□□□□□ -1.62
SSL2Q00578 LAP3YNL239W 1365 nt4.92□□□□□ -1.62
SSL2Q00578 ART10YLR392C 1557 nt4.92□□□□□ -1.62
SSL2Q00578 FAA3YIL009W 2085 nt4.92□□□□□ -1.62
SSL2Q00578 STB2YMR053C 2553 nt4.92□□□□□ -1.62
SSL2Q00578 CDC15YAR019C 2925 nt4.92□□□□□ -1.62
SSL2Q00578 TYW1YPL207W 2433 nt4.92□□□□□ -1.62
SSL2Q00578 RAD52YML032C 1416 nt4.92□□□□□ -1.62
SSL2Q00578 YCR015CYCR015C 954 nt4.92□□□□□ -1.62
SSL2Q00578 ATP16YDL004W 483 nt4.92□□□□□ -1.62
SSL2Q00578 snR7-SsnR7-S 179 nt4.92□□□□□ -1.62
SSL2Q00578 RAV2YDR202C 1056 nt4.92□□□□□ -1.62
SSL2Q00578 VMA7YGR020C 357 nt4.92□□□□□ -1.62
SSL2Q00578 IST3YIR005W 447 nt4.92□□□□□ -1.62
SSL2Q00578 AAD10YJR155W 867 nt4.92□□□□□ -1.62
SSL2Q00578 YKL123WYKL123W 381 nt4.92□□□□□ -1.62
SSL2Q00578 YAR030CYAR030C 342 nt4.92□□□□□ -1.62
SSL2Q00578 MGE1YOR232W 687 nt4.92□□□□□ -1.62
SSL2Q00578 RRP36YOR287C 903 nt4.92□□□□□ -1.62
SSL2Q00578 YPL114WYPL114W 420 nt4.92□□□□□ -1.62
SSL2Q00578 GDB1YPR184W 4611 nt4.92□□□□□ -1.62
SSL2Q00578 PEP5YMR231W 3090 nt4.92□□□□□ -1.62
SSL2Q00578 IKS1YJL057C 2004 nt4.92□□□□□ -1.62
SSL2Q00578 CNA1YLR433C 1662 nt4.92□□□□□ -1.62
SSL2Q00578 CYM1YDR430C 2970 nt4.92□□□□□ -1.62
SSL2Q00578 CDC48YDL126C 2508 nt4.91□□□□□ -1.62
SSL2Q00578 MAG2YLR427W 2013 nt4.91□□□□□ -1.62
SSL2Q00578 RPB7YDR404C 516 nt4.91□□□□□ -1.62
SSL2Q00578 YFH7YFR007W 1062 nt4.91□□□□□ -1.62
SSL2Q00578 BNA6YFR047C 888 nt4.91□□□□□ -1.62
SSL2Q00578 RNA15YGL044C 891 nt4.91□□□□□ -1.62
SSL2Q00578 CWC23YGL128C 852 nt4.91□□□□□ -1.62
SSL2Q00578 YGR015CYGR015C 987 nt4.91□□□□□ -1.62
SSL2Q00578 YGR111WYGR111W 1203 nt4.91□□□□□ -1.62
SSL2Q00578 NBP1YLR457C 960 nt4.91□□□□□ -1.62
SSL2Q00578 YMR082CYMR082C 357 nt4.91□□□□□ -1.62
SSL2Q00578 FYV6YNL133C 522 nt4.91□□□□□ -1.62
SSL2Q00578 YCL001W-AYCL001W-A 462 nt4.91□□□□□ -1.62
SSL2Q00578 POL12YBL035C 2118 nt4.91□□□□□ -1.62
SSL2Q00578 RKM2YDR198C 1440 nt4.9□□□□□ -1.62
SSL2Q00578 TYW3YGL050W 822 nt4.9□□□□□ -1.63
SSL2Q00578 YHL049CYHL049C 816 nt4.9□□□□□ -1.63
SSL2Q00578 YLR125WYLR125W 411 nt4.9□□□□□ -1.63
SSL2Q00578 CCS1YMR038C 750 nt4.9□□□□□ -1.63
SSL2Q00578 YOL106WYOL106W 354 nt4.9□□□□□ -1.63
SSL2Q00578 YGR266WYGR266W 2106 nt4.9□□□□□ -1.63
SSL2Q00578 ALG9YNL219C 1668 nt4.89□□□□□ -1.63
SSL2Q00578 NNK1YKL171W 2787 nt4.89□□□□□ -1.63
SSL2Q00578 YOL153CYOL153C 1746 nt4.89□□□□□ -1.63
SSL2Q00578 FRE1YLR214W 2061 nt4.89□□□□□ -1.63
SSL2Q00578 ADY3YDL239C 2373 nt4.89□□□□□ -1.63
SSL2Q00578 RRP8YDR083W 1179 nt4.89□□□□□ -1.63
SSL2Q00578 GSY1YFR015C 2127 nt4.89□□□□□ -1.63
SSL2Q00578 LYS5YGL154C 819 nt4.89□□□□□ -1.63
SSL2Q00578 YIP5YGL161C 933 nt4.89□□□□□ -1.63
SSL2Q00578 YGR016WYGR016W 573 nt4.89□□□□□ -1.63
SSL2Q00578 YJL218WYJL218W 591 nt4.89□□□□□ -1.63
SSL2Q00578 YLR222C-AYLR222C-A 231 nt4.89□□□□□ -1.63
SSL2Q00578 YLR339CYLR339C 552 nt4.89□□□□□ -1.63
SSL2Q00578 VPS71YML041C 843 nt4.89□□□□□ -1.63
SSL2Q00578 MED7YOL135C 669 nt4.89□□□□□ -1.63
SSL2Q00578 CIN5YOR028C 888 nt4.89□□□□□ -1.63
SSL2Q00578 MRM1YOR201C 1239 nt4.89□□□□□ -1.63
SSL2Q00578 YBR053CYBR053C 1077 nt4.89□□□□□ -1.63
SSL2Q00578 YBR063CYBR063C 1215 nt4.89□□□□□ -1.63
SSL2Q00578 JID1YPR061C 906 nt4.89□□□□□ -1.63
SSL2Q00578 LDH1YBR204C 1128 nt4.89□□□□□ -1.63
SSL2Q00578 GGA1YDR358W 1674 nt4.89□□□□□ -1.63
SSL2Q00578 ATM1YMR301C 2073 nt4.88□□□□□ -1.63
SSL2Q00578 LAS21YJL062W 2493 nt4.88□□□□□ -1.63
SSL2Q00578 VAC7YNL054W 3498 nt4.88□□□□□ -1.63
SSL2Q00578 ALG2YGL065C 1512 nt4.88□□□□□ -1.63
SSL2Q00578 GRC3YLL035W 1899 nt4.88□□□□□ -1.63
SSL2Q00578 TRF5YNL299W 1929 nt4.88□□□□□ -1.63
SSL2Q00578 SUR2YDR297W 1050 nt4.88□□□□□ -1.63
SSL2Q00578 IRC22YEL001C 678 nt4.88□□□□□ -1.63
SSL2Q00578 VPS29YHR012W 849 nt4.88□□□□□ -1.63
SSL2Q00578 HTD2YHR067W 843 nt4.88□□□□□ -1.63
SSL2Q00578 AIM18YHR198C 966 nt4.88□□□□□ -1.63
SSL2Q00578 BOS1YLR078C 735 nt4.88□□□□□ -1.63
SSL2Q00578 SPS19YNL202W 879 nt4.88□□□□□ -1.63
SSL2Q00578 YNL320WYNL320W 855 nt4.88□□□□□ -1.63
SSL2Q00578 MGR2YPL098C 342 nt4.88□□□□□ -1.63
SSL2Q00578 SPP381YBR152W 876 nt4.88□□□□□ -1.63
SSL2Q00578 CNS1YBR155W 1158 nt4.88□□□□□ -1.63
SSL2Q00578 YBR219CYBR219C 384 nt4.88□□□□□ -1.63
SSL2Q00578 FDC1YDR539W 1512 nt4.87□□□□□ -1.63
SSL2Q00578 TCM62YBR044C 1719 nt4.87□□□□□ -1.63
SSL2Q00578 CPR4YCR069W 957 nt4.87□□□□□ -1.63
SSL2Q00578 snR83snR83 306 nt4.87□□□□□ -1.63
SSL2Q00578 COM2YER130C 1332 nt4.87□□□□□ -1.63
SSL2Q00578 EMP47YFL048C 1338 nt4.87□□□□□ -1.63
SSL2Q00578 YIL001WYIL001W 1542 nt4.87□□□□□ -1.63
SSL2Q00578 THI20YOL055C 1656 nt4.86□□□□□ -1.63
SSL2Q00578 TRM1YDR120C 1713 nt4.86□□□□□ -1.63
SSL2Q00578 YCF1YDR135C 4548 nt4.86□□□□□ -1.63
SSL2Q00578 snR56snR56 88 nt4.86□□□□□ -1.63
SSL2Q00578 SPR28YDR218C 1272 nt4.86□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms