Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUPT4H1P63272 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SUPT4H1P63272 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.07■□□□□ 0.48
SUPT4H1P63272 AC120024.1-201ENST00000562672 995 ntBASIC18.07■□□□□ 0.48
SUPT4H1P63272 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SUPT4H1P63272 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUPT4H1P63272 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUPT4H1P63272 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUPT4H1P63272 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUPT4H1P63272 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SUPT4H1P63272 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.07■□□□□ 0.48
SUPT4H1P63272 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.07■□□□□ 0.48
SUPT4H1P63272 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SUPT4H1P63272 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SUPT4H1P63272 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SUPT4H1P63272 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SUPT4H1P63272 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SUPT4H1P63272 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.06■□□□□ 0.48
SUPT4H1P63272 AF106564.1-201ENST00000607058 2553 ntBASIC18.06■□□□□ 0.48
SUPT4H1P63272 Z98882.1-201ENST00000622160 2253 ntBASIC18.06■□□□□ 0.48
SUPT4H1P63272 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SUPT4H1P63272 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SUPT4H1P63272 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SUPT4H1P63272 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SUPT4H1P63272 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SUPT4H1P63272 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 AL121603.2-201ENST00000557373 2117 ntBASIC18.05■□□□□ 0.48
SUPT4H1P63272 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SUPT4H1P63272 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.05■□□□□ 0.48
SUPT4H1P63272 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SUPT4H1P63272 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.04■□□□□ 0.48
SUPT4H1P63272 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
SUPT4H1P63272 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.04■□□□□ 0.48
SUPT4H1P63272 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.04■□□□□ 0.48
SUPT4H1P63272 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.04■□□□□ 0.48
SUPT4H1P63272 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SUPT4H1P63272 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SUPT4H1P63272 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SUPT4H1P63272 LINC01529-204ENST00000636474 1715 ntBASIC18.03■□□□□ 0.48
SUPT4H1P63272 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT4H1P63272 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT4H1P63272 FEM1AP4-201ENST00000443167 1987 ntBASIC18.03■□□□□ 0.48
SUPT4H1P63272 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT4H1P63272 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT4H1P63272 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT4H1P63272 MIR4281-201ENST00000580852 62 ntBASIC18.03■□□□□ 0.48
SUPT4H1P63272 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.03■□□□□ 0.48
SUPT4H1P63272 AC129492.7-201ENST00000622992 756 ntBASIC18.03■□□□□ 0.48
SUPT4H1P63272 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.03■□□□□ 0.48
SUPT4H1P63272 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT4H1P63272 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT4H1P63272 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.03■□□□□ 0.48
SUPT4H1P63272 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SUPT4H1P63272 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
SUPT4H1P63272 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SUPT4H1P63272 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.02■□□□□ 0.48
SUPT4H1P63272 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.02■□□□□ 0.48
SUPT4H1P63272 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SUPT4H1P63272 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.02■□□□□ 0.48
SUPT4H1P63272 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SUPT4H1P63272 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SUPT4H1P63272 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
SUPT4H1P63272 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SUPT4H1P63272 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms