Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LINC01960-201ENST00000563759 1884 ntBASIC20.77■□□□□ 0.92
SKP1P63208 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKP1P63208 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.77■□□□□ 0.92
SKP1P63208 IGHV3-19-201ENST00000521488 291 ntBASIC20.77■□□□□ 0.92
SKP1P63208 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.77■□□□□ 0.92
SKP1P63208 AC010525.1-201ENST00000585559 441 ntBASIC20.77■□□□□ 0.92
SKP1P63208 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SKP1P63208 AL031602.1-201ENST00000633169 911 ntBASIC20.77■□□□□ 0.92
SKP1P63208 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SKP1P63208 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.77■□□□□ 0.91
SKP1P63208 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SKP1P63208 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SKP1P63208 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SKP1P63208 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SKP1P63208 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.76■□□□□ 0.91
SKP1P63208 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.76■□□□□ 0.91
SKP1P63208 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.76■□□□□ 0.91
SKP1P63208 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.76■□□□□ 0.91
SKP1P63208 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.76■□□□□ 0.91
SKP1P63208 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SKP1P63208 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKP1P63208 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKP1P63208 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SKP1P63208 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKP1P63208 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.75■□□□□ 0.91
SKP1P63208 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKP1P63208 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SKP1P63208 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.75■□□□□ 0.91
SKP1P63208 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.75■□□□□ 0.91
SKP1P63208 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SKP1P63208 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKP1P63208 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.74■□□□□ 0.91
SKP1P63208 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.74■□□□□ 0.91
SKP1P63208 AC010141.3-201ENST00000456659 717 ntBASIC20.74■□□□□ 0.91
SKP1P63208 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.74■□□□□ 0.91
SKP1P63208 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SKP1P63208 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SKP1P63208 AC019069.1-201ENST00000610008 1333 ntBASIC20.74■□□□□ 0.91
SKP1P63208 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SKP1P63208 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SKP1P63208 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SKP1P63208 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SKP1P63208 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SKP1P63208 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SKP1P63208 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SKP1P63208 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SKP1P63208 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SKP1P63208 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SKP1P63208 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.72■□□□□ 0.91
SKP1P63208 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKP1P63208 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.72■□□□□ 0.91
SKP1P63208 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKP1P63208 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.72■□□□□ 0.91
SKP1P63208 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKP1P63208 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKP1P63208 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKP1P63208 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SKP1P63208 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKP1P63208 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKP1P63208 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKP1P63208 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SKP1P63208 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.71■□□□□ 0.91
SKP1P63208 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKP1P63208 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.71■□□□□ 0.91
SKP1P63208 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SKP1P63208 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SKP1P63208 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.71■□□□□ 0.91
SKP1P63208 TSPY26P-201ENST00000476365 1326 ntBASIC20.71■□□□□ 0.91
SKP1P63208 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SKP1P63208 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SKP1P63208 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKP1P63208 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.7■□□□□ 0.9
SKP1P63208 ESRRAP2-201ENST00000418437 1549 ntBASIC20.7■□□□□ 0.9
SKP1P63208 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.7■□□□□ 0.9
SKP1P63208 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SKP1P63208 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKP1P63208 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SKP1P63208 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SKP1P63208 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
SKP1P63208 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKP1P63208 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKP1P63208 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SKP1P63208 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.69■□□□□ 0.9
SKP1P63208 AC105265.2-201ENST00000467189 838 ntBASIC20.69■□□□□ 0.9
SKP1P63208 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.69■□□□□ 0.9
SKP1P63208 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKP1P63208 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms