Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC139795.1-202ENST00000500444 432 ntBASIC19.99■□□□□ 0.79
CDC42P60953 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC42P60953 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC42P60953 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC42P60953 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC42P60953 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC42P60953 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC42P60953 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDC42P60953 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC42P60953 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC42P60953 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDC42P60953 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDC42P60953 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.98■□□□□ 0.79
CDC42P60953 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.98■□□□□ 0.79
CDC42P60953 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC42P60953 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.98■□□□□ 0.79
CDC42P60953 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.98■□□□□ 0.79
CDC42P60953 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.98■□□□□ 0.79
CDC42P60953 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC42P60953 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC42P60953 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC42P60953 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDC42P60953 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42P60953 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42P60953 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42P60953 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC42P60953 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42P60953 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42P60953 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42P60953 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC42P60953 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42P60953 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.96■□□□□ 0.79
CDC42P60953 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42P60953 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42P60953 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42P60953 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42P60953 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDC42P60953 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42P60953 MIR4281-201ENST00000580852 62 ntBASIC19.96■□□□□ 0.79
CDC42P60953 THA1P-201ENST00000590384 1145 ntBASIC19.96■□□□□ 0.79
CDC42P60953 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC42P60953 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CDC42P60953 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC42P60953 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.95■□□□□ 0.78
CDC42P60953 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42P60953 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.95■□□□□ 0.78
CDC42P60953 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC42P60953 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDC42P60953 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42P60953 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42P60953 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
CDC42P60953 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC42P60953 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42P60953 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42P60953 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42P60953 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC42P60953 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42P60953 LINC01960-201ENST00000563759 1884 ntBASIC19.94■□□□□ 0.78
CDC42P60953 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42P60953 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CDC42P60953 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42P60953 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.94■□□□□ 0.78
CDC42P60953 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDC42P60953 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42P60953 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.94■□□□□ 0.78
CDC42P60953 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
CDC42P60953 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CDC42P60953 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42P60953 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42P60953 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDC42P60953 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.93■□□□□ 0.78
CDC42P60953 LINC01529-204ENST00000636474 1715 ntBASIC19.93■□□□□ 0.78
CDC42P60953 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDC42P60953 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42P60953 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42P60953 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42P60953 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42P60953 KRT18P24-201ENST00000344739 1156 ntBASIC19.93■□□□□ 0.78
CDC42P60953 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42P60953 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDC42P60953 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42P60953 SLC25A24-204ENST00000569674 2357 ntBASIC19.93■□□□□ 0.78
CDC42P60953 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42P60953 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.93■□□□□ 0.78
CDC42P60953 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDC42P60953 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.93■□□□□ 0.78
CDC42P60953 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42P60953 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDC42P60953 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.92■□□□□ 0.78
CDC42P60953 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDC42P60953 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42P60953 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.92■□□□□ 0.78
CDC42P60953 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.92■□□□□ 0.78
CDC42P60953 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42P60953 U85056.1-201ENST00000616429 682 ntBASIC19.92■□□□□ 0.78
CDC42P60953 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDC42P60953 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42P60953 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC42P60953 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDC42P60953 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms