Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
TTC3P53804 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC3P53804 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC3P53804 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.81■■□□□ 1.4
TTC3P53804 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.81■■□□□ 1.4
TTC3P53804 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC3P53804 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TTC3P53804 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TTC3P53804 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TTC3P53804 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TTC3P53804 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TTC3P53804 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.8■■□□□ 1.4
TTC3P53804 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC3P53804 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.79■■□□□ 1.4
TTC3P53804 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC3P53804 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC3P53804 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.79■■□□□ 1.4
TTC3P53804 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.79■■□□□ 1.4
TTC3P53804 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC3P53804 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC3P53804 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.78■■□□□ 1.4
TTC3P53804 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
TTC3P53804 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TTC3P53804 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.78■■□□□ 1.4
TTC3P53804 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TTC3P53804 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.77■■□□□ 1.4
TTC3P53804 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.77■■□□□ 1.4
TTC3P53804 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.77■■□□□ 1.4
TTC3P53804 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.77■■□□□ 1.4
TTC3P53804 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC3P53804 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TTC3P53804 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC3P53804 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC3P53804 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.77■■□□□ 1.4
TTC3P53804 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC3P53804 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.77■■□□□ 1.39
TTC3P53804 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC3P53804 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.76■■□□□ 1.39
TTC3P53804 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC3P53804 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.76■■□□□ 1.39
TTC3P53804 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.76■■□□□ 1.39
TTC3P53804 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.76■■□□□ 1.39
TTC3P53804 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC3P53804 BID-214ENST00000617586 542 ntTSL 5 BASIC23.76■■□□□ 1.39
TTC3P53804 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC3P53804 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
TTC3P53804 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC3P53804 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.76■■□□□ 1.39
TTC3P53804 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
TTC3P53804 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC3P53804 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.75■■□□□ 1.39
TTC3P53804 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.75■■□□□ 1.39
TTC3P53804 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC3P53804 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TTC3P53804 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TTC3P53804 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC3P53804 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TTC3P53804 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TTC3P53804 AC010141.3-201ENST00000456659 717 ntBASIC23.74■■□□□ 1.39
TTC3P53804 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.74■■□□□ 1.39
TTC3P53804 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC3P53804 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC3P53804 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC3P53804 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC3P53804 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC3P53804 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TTC3P53804 CROCCP5-201ENST00000436658 830 ntBASIC23.74■■□□□ 1.39
TTC3P53804 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.74■■□□□ 1.39
TTC3P53804 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.74■■□□□ 1.39
TTC3P53804 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TTC3P53804 AL139125.2-201ENST00000623134 1869 ntBASIC23.73■■□□□ 1.39
TTC3P53804 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC3P53804 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.73■■□□□ 1.39
TTC3P53804 AC104771.1-201ENST00000603335 964 ntBASIC23.73■■□□□ 1.39
TTC3P53804 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TTC3P53804 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC3P53804 AL353803.4-201ENST00000565882 1934 ntBASIC23.72■■□□□ 1.39
TTC3P53804 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC3P53804 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC3P53804 KRT18P11-201ENST00000435214 1283 ntBASIC23.72■■□□□ 1.39
TTC3P53804 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.72■■□□□ 1.39
TTC3P53804 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC3P53804 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC3P53804 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TTC3P53804 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TTC3P53804 MIR663A-201ENST00000385250 93 ntBASIC23.72■■□□□ 1.39
TTC3P53804 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.72■■□□□ 1.39
TTC3P53804 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.72■■□□□ 1.39
TTC3P53804 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.71■■□□□ 1.39
TTC3P53804 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.71■■□□□ 1.39
TTC3P53804 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.71■■□□□ 1.39
TTC3P53804 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.71■■□□□ 1.39
TTC3P53804 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC3P53804 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC3P53804 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.71■■□□□ 1.39
TTC3P53804 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
TTC3P53804 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
TTC3P53804 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.7■■□□□ 1.38
TTC3P53804 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TTC3P53804 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms