Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 HSCB-202ENST00000398941 955 ntTSL 2 BASIC31.8■■■□□ 2.68
CLTCL1P53675 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.8■■■□□ 2.68
CLTCL1P53675 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CLTCL1P53675 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.8■■■□□ 2.68
CLTCL1P53675 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC31.8■■■□□ 2.68
CLTCL1P53675 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.8■■■□□ 2.68
CLTCL1P53675 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC31.8■■■□□ 2.68
CLTCL1P53675 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CLTCL1P53675 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC31.79■■■□□ 2.68
CLTCL1P53675 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CLTCL1P53675 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
CLTCL1P53675 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CLTCL1P53675 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CLTCL1P53675 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
CLTCL1P53675 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
CLTCL1P53675 AC016769.1-201ENST00000409132 1010 ntBASIC31.78■■■□□ 2.68
CLTCL1P53675 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CLTCL1P53675 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.78■■■□□ 2.68
CLTCL1P53675 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CLTCL1P53675 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CLTCL1P53675 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CLTCL1P53675 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.78■■■□□ 2.68
CLTCL1P53675 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.77■■■□□ 2.68
CLTCL1P53675 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CLTCL1P53675 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CLTCL1P53675 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.77■■■□□ 2.68
CLTCL1P53675 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CLTCL1P53675 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC31.76■■■□□ 2.68
CLTCL1P53675 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
CLTCL1P53675 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CLTCL1P53675 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CLTCL1P53675 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CLTCL1P53675 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.76■■■□□ 2.67
CLTCL1P53675 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
CLTCL1P53675 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CLTCL1P53675 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CLTCL1P53675 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.75■■■□□ 2.67
CLTCL1P53675 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.75■■■□□ 2.67
CLTCL1P53675 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.75■■■□□ 2.67
CLTCL1P53675 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
CLTCL1P53675 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC31.75■■■□□ 2.67
CLTCL1P53675 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
CLTCL1P53675 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.75■■■□□ 2.67
CLTCL1P53675 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.75■■■□□ 2.67
CLTCL1P53675 DUSP8P3-201ENST00000399571 1760 ntBASIC31.75■■■□□ 2.67
CLTCL1P53675 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CLTCL1P53675 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.75■■■□□ 2.67
CLTCL1P53675 HLA-L-209ENST00000420110 1011 ntBASIC31.75■■■□□ 2.67
CLTCL1P53675 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CLTCL1P53675 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31.74■■■□□ 2.67
CLTCL1P53675 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CLTCL1P53675 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC31.73■■■□□ 2.67
CLTCL1P53675 CDCA4P2-201ENST00000441182 718 ntBASIC31.73■■■□□ 2.67
CLTCL1P53675 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC31.72■■■□□ 2.67
CLTCL1P53675 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.72■■■□□ 2.67
CLTCL1P53675 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC31.72■■■□□ 2.67
CLTCL1P53675 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CLTCL1P53675 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.72■■■□□ 2.67
CLTCL1P53675 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CLTCL1P53675 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.71■■■□□ 2.67
CLTCL1P53675 AC080038.1-201ENST00000611274 1154 ntBASIC31.71■■■□□ 2.67
CLTCL1P53675 CPT2-209ENST00000636935 803 ntTSL 5 BASIC31.71■■■□□ 2.67
CLTCL1P53675 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC31.71■■■□□ 2.67
CLTCL1P53675 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CLTCL1P53675 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.71■■■□□ 2.67
CLTCL1P53675 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CLTCL1P53675 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CLTCL1P53675 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CLTCL1P53675 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.7■■■□□ 2.67
CLTCL1P53675 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CLTCL1P53675 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CLTCL1P53675 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
CLTCL1P53675 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.7■■■□□ 2.66
CLTCL1P53675 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.7■■■□□ 2.66
CLTCL1P53675 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CLTCL1P53675 AC092068.2-201ENST00000590491 1708 ntBASIC31.69■■■□□ 2.66
CLTCL1P53675 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CLTCL1P53675 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.69■■■□□ 2.66
CLTCL1P53675 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.69■■■□□ 2.66
CLTCL1P53675 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.69■■■□□ 2.66
CLTCL1P53675 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
CLTCL1P53675 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CLTCL1P53675 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CLTCL1P53675 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
CLTCL1P53675 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CLTCL1P53675 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.68■■■□□ 2.66
CLTCL1P53675 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC31.68■■■□□ 2.66
CLTCL1P53675 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CLTCL1P53675 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CLTCL1P53675 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CLTCL1P53675 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CLTCL1P53675 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CLTCL1P53675 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.68■■■□□ 2.66
CLTCL1P53675 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CLTCL1P53675 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CLTCL1P53675 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.67■■■□□ 2.66
CLTCL1P53675 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CLTCL1P53675 TK2-208ENST00000545043 1120 ntTSL 2 BASIC31.67■■■□□ 2.66
CLTCL1P53675 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CLTCL1P53675 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms