Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGA2P52926 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HMGA2P52926 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGA2P52926 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGA2P52926 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGA2P52926 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGA2P52926 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGA2P52926 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
HMGA2P52926 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGA2P52926 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGA2P52926 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.04■□□□□ 0.8
HMGA2P52926 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGA2P52926 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGA2P52926 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HMGA2P52926 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGA2P52926 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HMGA2P52926 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGA2P52926 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGA2P52926 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGA2P52926 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGA2P52926 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.03■□□□□ 0.8
HMGA2P52926 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGA2P52926 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HMGA2P52926 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HMGA2P52926 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.03■□□□□ 0.8
HMGA2P52926 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGA2P52926 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGA2P52926 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.02■□□□□ 0.8
HMGA2P52926 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGA2P52926 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGA2P52926 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
HMGA2P52926 YBX1P4-201ENST00000392794 808 ntBASIC20.02■□□□□ 0.8
HMGA2P52926 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.02■□□□□ 0.8
HMGA2P52926 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
HMGA2P52926 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.02■□□□□ 0.8
HMGA2P52926 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HMGA2P52926 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.02■□□□□ 0.8
HMGA2P52926 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGA2P52926 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGA2P52926 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGA2P52926 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMGA2P52926 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HMGA2P52926 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMGA2P52926 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMGA2P52926 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HMGA2P52926 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HMGA2P52926 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGA2P52926 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGA2P52926 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMGA2P52926 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
HMGA2P52926 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMGA2P52926 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMGA2P52926 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGA2P52926 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HMGA2P52926 AC004687.1-201ENST00000579003 1625 ntBASIC20.01■□□□□ 0.79
HMGA2P52926 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20■□□□□ 0.79
HMGA2P52926 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGA2P52926 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGA2P52926 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20■□□□□ 0.79
HMGA2P52926 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGA2P52926 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20■□□□□ 0.79
HMGA2P52926 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMGA2P52926 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HMGA2P52926 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20■□□□□ 0.79
HMGA2P52926 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA2P52926 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA2P52926 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HMGA2P52926 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA2P52926 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
HMGA2P52926 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HMGA2P52926 AC009102.2-201ENST00000606772 1639 ntBASIC19.99■□□□□ 0.79
HMGA2P52926 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.99■□□□□ 0.79
HMGA2P52926 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGA2P52926 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.99■□□□□ 0.79
HMGA2P52926 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.99■□□□□ 0.79
HMGA2P52926 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMGA2P52926 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA2P52926 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA2P52926 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HMGA2P52926 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA2P52926 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA2P52926 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA2P52926 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA2P52926 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HMGA2P52926 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMGA2P52926 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA2P52926 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.98■□□□□ 0.79
HMGA2P52926 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.98■□□□□ 0.79
HMGA2P52926 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.98■□□□□ 0.79
HMGA2P52926 AC012354.3-201ENST00000623734 483 ntBASIC19.98■□□□□ 0.79
HMGA2P52926 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms