Protein–RNA interactions for Protein: P50461

CSRP3, Cysteine and glycine-rich protein 3, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3P50461 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSRP3P50461 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSRP3P50461 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
CSRP3P50461 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSRP3P50461 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSRP3P50461 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSRP3P50461 PBX2P1-201ENST00000493219 1291 ntBASIC21.82■■□□□ 1.08
CSRP3P50461 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSRP3P50461 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CSRP3P50461 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.82■■□□□ 1.08
CSRP3P50461 AC010997.5-201ENST00000609182 354 ntBASIC21.82■■□□□ 1.08
CSRP3P50461 AC009086.3-201ENST00000623486 1008 ntBASIC21.82■■□□□ 1.08
CSRP3P50461 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.82■■□□□ 1.08
CSRP3P50461 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSRP3P50461 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSRP3P50461 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSRP3P50461 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CSRP3P50461 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.81■■□□□ 1.08
CSRP3P50461 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.81■■□□□ 1.08
CSRP3P50461 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.81■■□□□ 1.08
CSRP3P50461 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.81■■□□□ 1.08
CSRP3P50461 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSRP3P50461 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CSRP3P50461 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.81■■□□□ 1.08
CSRP3P50461 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.81■■□□□ 1.08
CSRP3P50461 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CSRP3P50461 C17orf82-201ENST00000623772 1530 ntBASIC21.8■■□□□ 1.08
CSRP3P50461 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CSRP3P50461 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CSRP3P50461 LINC01960-201ENST00000563759 1884 ntBASIC21.8■■□□□ 1.08
CSRP3P50461 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.8■■□□□ 1.08
CSRP3P50461 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSRP3P50461 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.8■■□□□ 1.08
CSRP3P50461 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CSRP3P50461 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.8■■□□□ 1.08
CSRP3P50461 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.8■■□□□ 1.08
CSRP3P50461 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.8■■□□□ 1.08
CSRP3P50461 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CSRP3P50461 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CSRP3P50461 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CSRP3P50461 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CSRP3P50461 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.79■■□□□ 1.08
CSRP3P50461 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.79■■□□□ 1.08
CSRP3P50461 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CSRP3P50461 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CSRP3P50461 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.79■■□□□ 1.08
CSRP3P50461 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.79■■□□□ 1.08
CSRP3P50461 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSRP3P50461 AC007375.3-201ENST00000600936 2314 ntBASIC21.78■■□□□ 1.08
CSRP3P50461 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CSRP3P50461 CA15P2-201ENST00000611168 834 ntBASIC21.78■■□□□ 1.08
CSRP3P50461 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.78■■□□□ 1.08
CSRP3P50461 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CSRP3P50461 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSRP3P50461 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSRP3P50461 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CSRP3P50461 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSRP3P50461 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSRP3P50461 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSRP3P50461 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.77■■□□□ 1.08
CSRP3P50461 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CSRP3P50461 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CSRP3P50461 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSRP3P50461 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
CSRP3P50461 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.77■■□□□ 1.08
CSRP3P50461 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.77■■□□□ 1.08
CSRP3P50461 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSRP3P50461 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSRP3P50461 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.77■■□□□ 1.07
CSRP3P50461 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.76■■□□□ 1.07
CSRP3P50461 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSRP3P50461 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.76■■□□□ 1.07
CSRP3P50461 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSRP3P50461 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSRP3P50461 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSRP3P50461 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CSRP3P50461 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.76■■□□□ 1.07
CSRP3P50461 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.76■■□□□ 1.07
CSRP3P50461 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSRP3P50461 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSRP3P50461 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSRP3P50461 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.75■■□□□ 1.07
CSRP3P50461 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CSRP3P50461 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.75■■□□□ 1.07
CSRP3P50461 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSRP3P50461 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CSRP3P50461 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.75■■□□□ 1.07
CSRP3P50461 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSRP3P50461 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms