Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SLC6A12P48065 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC6A12P48065 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC6A12P48065 SYT6-210ENST00000641643 1587 ntBASIC21.23■□□□□ 0.99
SLC6A12P48065 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC6A12P48065 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
SLC6A12P48065 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A12P48065 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
SLC6A12P48065 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A12P48065 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A12P48065 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SLC6A12P48065 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC6A12P48065 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC6A12P48065 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SLC6A12P48065 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC6A12P48065 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A12P48065 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A12P48065 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC6A12P48065 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC6A12P48065 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SLC6A12P48065 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A12P48065 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A12P48065 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A12P48065 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A12P48065 AL136116.3-201ENST00000402907 1138 ntBASIC21.21■□□□□ 0.99
SLC6A12P48065 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A12P48065 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SLC6A12P48065 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A12P48065 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A12P48065 AC131212.1-201ENST00000613771 668 ntBASIC21.21■□□□□ 0.99
SLC6A12P48065 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.21■□□□□ 0.99
SLC6A12P48065 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC6A12P48065 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SLC6A12P48065 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A12P48065 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A12P48065 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC6A12P48065 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A12P48065 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC6A12P48065 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC6A12P48065 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SLC6A12P48065 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.2■□□□□ 0.99
SLC6A12P48065 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A12P48065 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC6A12P48065 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A12P48065 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A12P48065 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A12P48065 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A12P48065 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A12P48065 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SLC6A12P48065 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A12P48065 AC092053.2-201ENST00000640557 1818 ntBASIC21.2■□□□□ 0.98
SLC6A12P48065 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC6A12P48065 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC6A12P48065 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A12P48065 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A12P48065 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SLC6A12P48065 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SLC6A12P48065 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A12P48065 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC6A12P48065 AC011298.3-201ENST00000615796 283 ntBASIC21.19■□□□□ 0.98
SLC6A12P48065 AC136469.2-201ENST00000623944 1028 ntBASIC21.19■□□□□ 0.98
SLC6A12P48065 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SLC6A12P48065 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC6A12P48065 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SLC6A12P48065 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC6A12P48065 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A12P48065 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A12P48065 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A12P48065 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC6A12P48065 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC6A12P48065 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SLC6A12P48065 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A12P48065 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A12P48065 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC6A12P48065 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SLC6A12P48065 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A12P48065 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC6A12P48065 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC6A12P48065 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A12P48065 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC6A12P48065 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC6A12P48065 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC6A12P48065 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC6A12P48065 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SLC6A12P48065 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC6A12P48065 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A12P48065 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
SLC6A12P48065 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.16■□□□□ 0.98
SLC6A12P48065 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC6A12P48065 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC6A12P48065 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A12P48065 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC6A12P48065 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SLC6A12P48065 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC6A12P48065 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A12P48065 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A12P48065 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A12P48065 AC010525.1-201ENST00000585559 441 ntBASIC21.16■□□□□ 0.98
SLC6A12P48065 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC6A12P48065 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms