Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC3P40938 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RFC3P40938 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.03■□□□□ 0.8
RFC3P40938 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.03■□□□□ 0.8
RFC3P40938 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC3P40938 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFC3P40938 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
RFC3P40938 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC3P40938 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC3P40938 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.02■□□□□ 0.8
RFC3P40938 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RFC3P40938 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.02■□□□□ 0.8
RFC3P40938 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.02■□□□□ 0.8
RFC3P40938 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC3P40938 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC3P40938 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.02■□□□□ 0.8
RFC3P40938 AC027612.3-201ENST00000413684 1047 ntBASIC20.02■□□□□ 0.8
RFC3P40938 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
RFC3P40938 AC034268.1-201ENST00000441047 882 ntBASIC20.02■□□□□ 0.8
RFC3P40938 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RFC3P40938 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.02■□□□□ 0.8
RFC3P40938 AL354811.1-201ENST00000610286 706 ntBASIC20.02■□□□□ 0.8
RFC3P40938 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.02■□□□□ 0.8
RFC3P40938 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.02■□□□□ 0.8
RFC3P40938 AC105233.4-201ENST00000642045 216 ntBASIC20.02■□□□□ 0.8
RFC3P40938 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RFC3P40938 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC3P40938 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RFC3P40938 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFC3P40938 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RFC3P40938 ANOS2P-203ENST00000472227 1816 ntBASIC20.02■□□□□ 0.79
RFC3P40938 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RFC3P40938 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC3P40938 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFC3P40938 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RFC3P40938 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RFC3P40938 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.01■□□□□ 0.79
RFC3P40938 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC3P40938 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC3P40938 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RFC3P40938 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20■□□□□ 0.79
RFC3P40938 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20■□□□□ 0.79
RFC3P40938 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20■□□□□ 0.79
RFC3P40938 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20■□□□□ 0.79
RFC3P40938 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 DUX4L2-201ENST00000561772 1275 ntBASIC20■□□□□ 0.79
RFC3P40938 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20■□□□□ 0.79
RFC3P40938 DUX4L6-201ENST00000626483 1275 ntBASIC20■□□□□ 0.79
RFC3P40938 DUX4L1-201ENST00000627662 1275 ntBASIC20■□□□□ 0.79
RFC3P40938 DUX4L8-201ENST00000629013 1275 ntBASIC20■□□□□ 0.79
RFC3P40938 DUX4L3-201ENST00000630187 1275 ntBASIC20■□□□□ 0.79
RFC3P40938 DUX4L7-201ENST00000630678 1275 ntBASIC20■□□□□ 0.79
RFC3P40938 DUX4L5-201ENST00000630834 1275 ntBASIC20■□□□□ 0.79
RFC3P40938 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20■□□□□ 0.79
RFC3P40938 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20■□□□□ 0.79
RFC3P40938 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20■□□□□ 0.79
RFC3P40938 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RFC3P40938 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC3P40938 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RFC3P40938 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.99■□□□□ 0.79
RFC3P40938 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.99■□□□□ 0.79
RFC3P40938 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFC3P40938 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.99■□□□□ 0.79
RFC3P40938 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC3P40938 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC3P40938 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFC3P40938 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RFC3P40938 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RFC3P40938 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC3P40938 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RFC3P40938 KRT18P5-201ENST00000436075 1291 ntBASIC19.98■□□□□ 0.79
RFC3P40938 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RFC3P40938 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.98■□□□□ 0.79
RFC3P40938 CCDC92B-201ENST00000575506 885 ntBASIC19.98■□□□□ 0.79
RFC3P40938 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.98■□□□□ 0.79
RFC3P40938 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFC3P40938 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.97■□□□□ 0.79
RFC3P40938 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC3P40938 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RFC3P40938 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC3P40938 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC3P40938 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFC3P40938 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RFC3P40938 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms