Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CEACAM3P40198 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CEACAM3P40198 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.82■□□□□ 0.44
CEACAM3P40198 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEACAM3P40198 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEACAM3P40198 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEACAM3P40198 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEACAM3P40198 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEACAM3P40198 BX842568.3-201ENST00000418104 571 ntBASIC17.82■□□□□ 0.44
CEACAM3P40198 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.82■□□□□ 0.44
CEACAM3P40198 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.82■□□□□ 0.44
CEACAM3P40198 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.82■□□□□ 0.44
CEACAM3P40198 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.82■□□□□ 0.44
CEACAM3P40198 AL355001.2-201ENST00000620617 1191 ntBASIC17.82■□□□□ 0.44
CEACAM3P40198 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.82■□□□□ 0.44
CEACAM3P40198 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CEACAM3P40198 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CEACAM3P40198 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CEACAM3P40198 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.81■□□□□ 0.44
CEACAM3P40198 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.81■□□□□ 0.44
CEACAM3P40198 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEACAM3P40198 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.81■□□□□ 0.44
CEACAM3P40198 AC012676.1-201ENST00000574705 1949 ntBASIC17.81■□□□□ 0.44
CEACAM3P40198 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.81■□□□□ 0.44
CEACAM3P40198 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.81■□□□□ 0.44
CEACAM3P40198 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEACAM3P40198 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEACAM3P40198 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEACAM3P40198 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.81■□□□□ 0.44
CEACAM3P40198 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CEACAM3P40198 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEACAM3P40198 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CEACAM3P40198 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CEACAM3P40198 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CEACAM3P40198 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.8■□□□□ 0.44
CEACAM3P40198 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
CEACAM3P40198 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.8■□□□□ 0.44
CEACAM3P40198 AC027682.1-201ENST00000562846 899 ntBASIC17.8■□□□□ 0.44
CEACAM3P40198 AC233992.3-201ENST00000607491 485 ntBASIC17.8■□□□□ 0.44
CEACAM3P40198 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.8■□□□□ 0.44
CEACAM3P40198 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CEACAM3P40198 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.8■□□□□ 0.44
CEACAM3P40198 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CEACAM3P40198 LINC01960-201ENST00000563759 1884 ntBASIC17.8■□□□□ 0.44
CEACAM3P40198 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CEACAM3P40198 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CEACAM3P40198 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CEACAM3P40198 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CEACAM3P40198 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CEACAM3P40198 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CEACAM3P40198 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CEACAM3P40198 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.79■□□□□ 0.44
CEACAM3P40198 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CEACAM3P40198 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.79■□□□□ 0.44
CEACAM3P40198 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CEACAM3P40198 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CEACAM3P40198 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CEACAM3P40198 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CEACAM3P40198 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CEACAM3P40198 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CEACAM3P40198 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.78■□□□□ 0.44
CEACAM3P40198 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.78■□□□□ 0.44
CEACAM3P40198 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.78■□□□□ 0.44
CEACAM3P40198 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CEACAM3P40198 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CEACAM3P40198 ESRRAP2-201ENST00000418437 1549 ntBASIC17.77■□□□□ 0.44
CEACAM3P40198 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CEACAM3P40198 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CEACAM3P40198 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.77■□□□□ 0.44
CEACAM3P40198 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CEACAM3P40198 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CEACAM3P40198 SLC47A1P1-202ENST00000449666 945 ntBASIC17.77■□□□□ 0.44
CEACAM3P40198 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CEACAM3P40198 AP005435.1-201ENST00000529293 1178 ntBASIC17.77■□□□□ 0.44
CEACAM3P40198 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.77■□□□□ 0.44
CEACAM3P40198 AC126544.1-201ENST00000580842 1059 ntBASIC17.77■□□□□ 0.44
CEACAM3P40198 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CEACAM3P40198 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CEACAM3P40198 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.77■□□□□ 0.44
CEACAM3P40198 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CEACAM3P40198 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CEACAM3P40198 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.77■□□□□ 0.43
CEACAM3P40198 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.76■□□□□ 0.43
CEACAM3P40198 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CEACAM3P40198 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CEACAM3P40198 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CEACAM3P40198 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms