Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YER147C-AYER147C-A 411 nt3.73□□□□□ -1.81
TDA11P38854 YGL132WYGL132W 336 nt3.73□□□□□ -1.81
TDA11P38854 MRP13YGR084C 1020 nt3.73□□□□□ -1.81
TDA11P38854 SHE3YBR130C 1278 nt3.73□□□□□ -1.81
TDA11P38854 YLR345WYLR345W 1530 nt3.73□□□□□ -1.81
TDA11P38854 HER2YMR293C 1395 nt3.73□□□□□ -1.81
TDA11P38854 MUP3YHL036W 1641 nt3.73□□□□□ -1.81
TDA11P38854 SRS2YJL092W 3525 nt3.73□□□□□ -1.81
TDA11P38854 PDR12YPL058C 4536 nt3.72□□□□□ -1.81
TDA11P38854 RAD54YGL163C 2697 nt3.72□□□□□ -1.81
TDA11P38854 GZF3YJL110C 1656 nt3.72□□□□□ -1.81
TDA11P38854 UBP6YFR010W 1500 nt3.72□□□□□ -1.81
TDA11P38854 PRP11YDL043C 801 nt3.72□□□□□ -1.81
TDA11P38854 CPR1YDR155C 489 nt3.72□□□□□ -1.81
TDA11P38854 MAG1YER142C 891 nt3.72□□□□□ -1.81
TDA11P38854 YGL152CYGL152C 678 nt3.72□□□□□ -1.81
TDA11P38854 YKE4YIL023C 1041 nt3.72□□□□□ -1.81
TDA11P38854 YJR038CYJR038C 363 nt3.72□□□□□ -1.81
TDA11P38854 TTI2YJR136C 1266 nt3.72□□□□□ -1.81
TDA11P38854 VPS21YOR089C 633 nt3.72□□□□□ -1.81
TDA11P38854 RRP36YOR287C 903 nt3.72□□□□□ -1.81
TDA11P38854 RET3YPL010W 570 nt3.72□□□□□ -1.81
TDA11P38854 YPL168WYPL168W 1293 nt3.72□□□□□ -1.81
TDA11P38854 PRP22YER013W 3438 nt3.72□□□□□ -1.81
TDA11P38854 KRE29YER038C 1395 nt3.72□□□□□ -1.81
TDA11P38854 MIH1YMR036C 1665 nt3.71□□□□□ -1.81
TDA11P38854 FAA1YOR317W 2103 nt3.71□□□□□ -1.81
TDA11P38854 ALR2YFL050C 2577 nt3.71□□□□□ -1.81
TDA11P38854 RSC58YLR033W 1509 nt3.71□□□□□ -1.82
TDA11P38854 OSH2YDL019C 3852 nt3.71□□□□□ -1.82
TDA11P38854 MAF1YDR005C 1188 nt3.71□□□□□ -1.82
TDA11P38854 SPO73YER046W 432 nt3.71□□□□□ -1.82
TDA11P38854 SLX8YER116C 825 nt3.71□□□□□ -1.82
TDA11P38854 SPI1YER150W 447 nt3.71□□□□□ -1.82
TDA11P38854 YFL041W-AYFL041W-A 192 nt3.71□□□□□ -1.82
TDA11P38854 COX2Q0250 756 nt3.71□□□□□ -1.82
TDA11P38854 YLR428CYLR428C 345 nt3.71□□□□□ -1.82
TDA11P38854 YET2YMR040W 483 nt3.71□□□□□ -1.82
TDA11P38854 MFA2YNL145W 117 nt3.71□□□□□ -1.82
TDA11P38854 PFA4YOL003C 1137 nt3.71□□□□□ -1.82
TDA11P38854 YOR008W-BYOR008W-B 102 nt3.71□□□□□ -1.82
TDA11P38854 CKS1YBR135W 453 nt3.71□□□□□ -1.82
TDA11P38854 HCM1YCR065W 1695 nt3.71□□□□□ -1.82
TDA11P38854 PHO92YDR374C 921 nt3.7□□□□□ -1.82
TDA11P38854 SUP56tL(CAA)A 82 nt3.7□□□□□ -1.82
TDA11P38854 SUP53tL(CAA)C 82 nt3.7□□□□□ -1.82
TDA11P38854 tL(CAA)DtL(CAA)D 82 nt3.7□□□□□ -1.82
TDA11P38854 tL(CAA)G1tL(CAA)G1 82 nt3.7□□□□□ -1.82
TDA11P38854 SUP54tL(CAA)G2 82 nt3.7□□□□□ -1.82
TDA11P38854 tL(CAA)G3tL(CAA)G3 82 nt3.7□□□□□ -1.82
TDA11P38854 tL(CAA)KtL(CAA)K 82 nt3.7□□□□□ -1.82
TDA11P38854 tL(CAA)LtL(CAA)L 82 nt3.7□□□□□ -1.82
TDA11P38854 tL(CAA)MtL(CAA)M 82 nt3.7□□□□□ -1.82
TDA11P38854 tL(CAA)NtL(CAA)N 82 nt3.7□□□□□ -1.82
TDA11P38854 tV(CAC)DtV(CAC)D 73 nt3.7□□□□□ -1.82
TDA11P38854 tV(CAC)HtV(CAC)H 73 nt3.7□□□□□ -1.82
TDA11P38854 YJR096WYJR096W 849 nt3.7□□□□□ -1.82
TDA11P38854 ERD2YBL040C 660 nt3.7□□□□□ -1.82
TDA11P38854 DSS4YPR017C 432 nt3.7□□□□□ -1.82
TDA11P38854 YPR059CYPR059C 387 nt3.7□□□□□ -1.82
TDA11P38854 SPA2YLL021W 4401 nt3.7□□□□□ -1.82
TDA11P38854 SMP3YOR149C 1551 nt3.7□□□□□ -1.82
TDA11P38854 ALE1YOR175C 1860 nt3.7□□□□□ -1.82
TDA11P38854 MSK1YNL073W 1731 nt3.7□□□□□ -1.82
TDA11P38854 DAN4YJR151C 3486 nt3.69□□□□□ -1.82
TDA11P38854 RCR2YDR003W 633 nt3.69□□□□□ -1.82
TDA11P38854 HTA2YBL003C 399 nt3.69□□□□□ -1.82
TDA11P38854 YPT7YML001W 627 nt3.69□□□□□ -1.82
TDA11P38854 MED7YOL135C 669 nt3.69□□□□□ -1.82
TDA11P38854 RTT109YLL002W 1311 nt3.69□□□□□ -1.82
TDA11P38854 PUS9YDL036C 1389 nt3.68□□□□□ -1.82
TDA11P38854 PHO87YCR037C 2772 nt3.68□□□□□ -1.82
TDA11P38854 RMD1YDL001W 1293 nt3.68□□□□□ -1.82
TDA11P38854 NUS1YDL193W 1128 nt3.68□□□□□ -1.82
TDA11P38854 CWC2YDL209C 1020 nt3.68□□□□□ -1.82
TDA11P38854 LSM6YDR378C 261 nt3.68□□□□□ -1.82
TDA11P38854 YFL065CYFL065C 309 nt3.68□□□□□ -1.82
TDA11P38854 YJR037WYJR037W 384 nt3.68□□□□□ -1.82
TDA11P38854 MRT4YKL009W 711 nt3.68□□□□□ -1.82
TDA11P38854 EMG1YLR186W 759 nt3.68□□□□□ -1.82
TDA11P38854 CDA2YLR308W 939 nt3.68□□□□□ -1.82
TDA11P38854 SWC7YLR385C 399 nt3.68□□□□□ -1.82
TDA11P38854 SHH3YMR118C 591 nt3.68□□□□□ -1.82
TDA11P38854 PPA2YMR267W 933 nt3.68□□□□□ -1.82
TDA11P38854 YPT53YNL093W 663 nt3.68□□□□□ -1.82
TDA11P38854 YGK3YOL128C 1128 nt3.68□□□□□ -1.82
TDA11P38854 CTF18YMR078C 2226 nt3.68□□□□□ -1.82
TDA11P38854 RTK1YDL025C 1863 nt3.68□□□□□ -1.82
TDA11P38854 EXO70YJL085W 1872 nt3.68□□□□□ -1.82
TDA11P38854 CIT1YNR001C 1440 nt3.68□□□□□ -1.82
TDA11P38854 STV1YMR054W 2673 nt3.67□□□□□ -1.82
TDA11P38854 YCR085WYCR085W 354 nt3.67□□□□□ -1.82
TDA11P38854 YDR249CYDR249C 1122 nt3.67□□□□□ -1.82
TDA11P38854 HIS5YIL116W 1158 nt3.67□□□□□ -1.82
TDA11P38854 AAD10YJR155W 867 nt3.67□□□□□ -1.82
TDA11P38854 CPR3YML078W 549 nt3.67□□□□□ -1.82
TDA11P38854 YML116W-AYML116W-A 303 nt3.67□□□□□ -1.82
TDA11P38854 BCK2YER167W 2556 nt3.67□□□□□ -1.82
TDA11P38854 IME4YGL192W 1803 nt3.67□□□□□ -1.82
TDA11P38854 PTR3YFR029W 2037 nt3.66□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms