Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.23■□□□□ 0.67
THBS4P35443 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.23■□□□□ 0.67
THBS4P35443 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.23■□□□□ 0.67
THBS4P35443 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
THBS4P35443 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS4P35443 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
THBS4P35443 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
THBS4P35443 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
THBS4P35443 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.22■□□□□ 0.67
THBS4P35443 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 EP400NL-214ENST00000641289 2402 ntBASIC19.22■□□□□ 0.67
THBS4P35443 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
THBS4P35443 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.22■□□□□ 0.67
THBS4P35443 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS4P35443 AC127496.7-201ENST00000625110 1798 ntBASIC19.21■□□□□ 0.67
THBS4P35443 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS4P35443 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THBS4P35443 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
THBS4P35443 SUDS3P1-201ENST00000505831 966 ntBASIC19.21■□□□□ 0.67
THBS4P35443 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.21■□□□□ 0.67
THBS4P35443 AC136469.2-201ENST00000623944 1028 ntBASIC19.21■□□□□ 0.67
THBS4P35443 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS4P35443 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.21■□□□□ 0.67
THBS4P35443 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS4P35443 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
THBS4P35443 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.21■□□□□ 0.67
THBS4P35443 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
THBS4P35443 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.2■□□□□ 0.66
THBS4P35443 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
THBS4P35443 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS4P35443 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.2■□□□□ 0.66
THBS4P35443 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS4P35443 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.2■□□□□ 0.66
THBS4P35443 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS4P35443 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS4P35443 AC242852.2-201ENST00000615738 1807 ntBASIC19.2■□□□□ 0.66
THBS4P35443 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
THBS4P35443 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
THBS4P35443 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 AF213884.3-201ENST00000563833 479 ntBASIC19.19■□□□□ 0.66
THBS4P35443 DUX4L4-201ENST00000566884 1269 ntBASIC19.19■□□□□ 0.66
THBS4P35443 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
THBS4P35443 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.19■□□□□ 0.66
THBS4P35443 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.19■□□□□ 0.66
THBS4P35443 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
THBS4P35443 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
THBS4P35443 LINC01529-204ENST00000636474 1715 ntBASIC19.19■□□□□ 0.66
THBS4P35443 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
THBS4P35443 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
THBS4P35443 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.18■□□□□ 0.66
THBS4P35443 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
THBS4P35443 AL136967.2-201ENST00000623968 743 ntBASIC19.18■□□□□ 0.66
THBS4P35443 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.18■□□□□ 0.66
THBS4P35443 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
THBS4P35443 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
THBS4P35443 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
THBS4P35443 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THBS4P35443 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS4P35443 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
THBS4P35443 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS4P35443 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
THBS4P35443 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
THBS4P35443 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS4P35443 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.17■□□□□ 0.66
THBS4P35443 AP001330.3-201ENST00000520123 633 ntBASIC19.17■□□□□ 0.66
THBS4P35443 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.17■□□□□ 0.66
THBS4P35443 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.17■□□□□ 0.66
THBS4P35443 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.17■□□□□ 0.66
THBS4P35443 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS4P35443 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
THBS4P35443 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms