Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 KIP3YGL216W 2418 nt2.89□□□□□ -1.95
CDC39P25655 RPO21YDL140C 5202 nt2.89□□□□□ -1.95
CDC39P25655 EMC1YCL045C 2283 nt2.89□□□□□ -1.95
CDC39P25655 YNR063WYNR063W 1824 nt2.89□□□□□ -1.95
CDC39P25655 DIN7YDR263C 1293 nt2.89□□□□□ -1.95
CDC39P25655 YHL026CYHL026C 948 nt2.89□□□□□ -1.95
CDC39P25655 TDA8YAL064C-A 381 nt2.89□□□□□ -1.95
CDC39P25655 YPL114WYPL114W 420 nt2.89□□□□□ -1.95
CDC39P25655 SRS2YJL092W 3525 nt2.88□□□□□ -1.95
CDC39P25655 GCN5YGR252W 1320 nt2.88□□□□□ -1.95
CDC39P25655 FAP7YDL166C 594 nt2.88□□□□□ -1.95
CDC39P25655 RTA1YGR213C 954 nt2.88□□□□□ -1.95
CDC39P25655 FDH2YPL275W 711 nt2.88□□□□□ -1.95
CDC39P25655 STE6YKL209C 3873 nt2.88□□□□□ -1.95
CDC39P25655 GPI1YGR216C 1830 nt2.88□□□□□ -1.95
CDC39P25655 RPP1AYDL081C 321 nt2.87□□□□□ -1.95
CDC39P25655 MRH1YDR033W 963 nt2.87□□□□□ -1.95
CDC39P25655 SEC53YFL045C 765 nt2.87□□□□□ -1.95
CDC39P25655 REV7YIL139C 738 nt2.87□□□□□ -1.95
CDC39P25655 YIL163CYIL163C 354 nt2.87□□□□□ -1.95
CDC39P25655 MDJ2YNL328C 441 nt2.87□□□□□ -1.95
CDC39P25655 TRM1YDR120C 1713 nt2.87□□□□□ -1.95
CDC39P25655 PKH1YDR490C 2301 nt2.87□□□□□ -1.95
CDC39P25655 MRE11YMR224C 2079 nt2.87□□□□□ -1.95
CDC39P25655 ARO9YHR137W 1542 nt2.87□□□□□ -1.95
CDC39P25655 COX23YHR116W 456 nt2.87□□□□□ -1.95
CDC39P25655 SKM1YOL113W 1968 nt2.86□□□□□ -1.95
CDC39P25655 MAK16YAL025C 921 nt2.86□□□□□ -1.95
CDC39P25655 YAL064W-BYAL064W-B 381 nt2.86□□□□□ -1.95
CDC39P25655 THI22YPR121W 1719 nt2.86□□□□□ -1.95
CDC39P25655 SHQ1YIL104C 1524 nt2.86□□□□□ -1.95
CDC39P25655 NUP60YAR002W 1620 nt2.86□□□□□ -1.95
CDC39P25655 RPO31YOR116C 4383 nt2.86□□□□□ -1.95
CDC39P25655 IRC18YJL037W 675 nt2.86□□□□□ -1.95
CDC39P25655 ORM2YLR350W 651 nt2.86□□□□□ -1.95
CDC39P25655 SEN1YLR430W 6696 nt2.85□□□□□ -1.95
CDC39P25655 SMP1YBR182C 1359 nt2.85□□□□□ -1.95
CDC39P25655 DAN4YJR151C 3486 nt2.85□□□□□ -1.95
CDC39P25655 DIT1YDR403W 1611 nt2.85□□□□□ -1.95
CDC39P25655 PCI8YIL071C 1335 nt2.85□□□□□ -1.95
CDC39P25655 VPS36YLR417W 1701 nt2.85□□□□□ -1.95
CDC39P25655 SCP1YOR367W 603 nt2.85□□□□□ -1.95
CDC39P25655 MDL1YLR188W 2088 nt2.85□□□□□ -1.95
CDC39P25655 TAF8YML114C 1533 nt2.84□□□□□ -1.95
CDC39P25655 YGR018CYGR018C 330 nt2.84□□□□□ -1.95
CDC39P25655 NVJ1YHR195W 966 nt2.84□□□□□ -1.95
CDC39P25655 MAD2YJL030W 591 nt2.84□□□□□ -1.95
CDC39P25655 SRP40YKR092C 1221 nt2.84□□□□□ -1.95
CDC39P25655 OM14YBR230C 405 nt2.84□□□□□ -1.95
CDC39P25655 APM4YOL062C 1476 nt2.84□□□□□ -1.95
CDC39P25655 STU2YLR045C 2667 nt2.84□□□□□ -1.95
CDC39P25655 HMF1YER057C 390 nt2.84□□□□□ -1.96
CDC39P25655 snR3snR3 194 nt2.84□□□□□ -1.96
CDC39P25655 snR42snR42 351 nt2.84□□□□□ -1.96
CDC39P25655 MIT1YEL007W 2001 nt2.84□□□□□ -1.96
CDC39P25655 HCM1YCR065W 1695 nt2.84□□□□□ -1.96
CDC39P25655 YLR352WYLR352W 2424 nt2.84□□□□□ -1.96
CDC39P25655 ACK1YDL203C 1872 nt2.84□□□□□ -1.96
CDC39P25655 YIL175WYIL175W 318 nt2.83□□□□□ -1.96
CDC39P25655 YJL222W-BYJL222W-B 138 nt2.83□□□□□ -1.96
CDC39P25655 YKL169CYKL169C 384 nt2.83□□□□□ -1.96
CDC39P25655 GTR1YML121W 933 nt2.83□□□□□ -1.96
CDC39P25655 MAC1YMR021C 1254 nt2.83□□□□□ -1.96
CDC39P25655 OMS1YDR316W 1416 nt2.83□□□□□ -1.96
CDC39P25655 ULS1YOR191W 4860 nt2.83□□□□□ -1.96
CDC39P25655 NUP85YJR042W 2235 nt2.83□□□□□ -1.96
CDC39P25655 YJL175WYJL175W 513 nt2.83□□□□□ -1.96
CDC39P25655 YRA2YKL214C 612 nt2.83□□□□□ -1.96
CDC39P25655 TMA10YLR327C 261 nt2.83□□□□□ -1.96
CDC39P25655 YMR316C-AYMR316C-A 312 nt2.83□□□□□ -1.96
CDC39P25655 MRM1YOR201C 1239 nt2.83□□□□□ -1.96
CDC39P25655 SLI1YGR212W 1407 nt2.82□□□□□ -1.96
CDC39P25655 SOD1YJR104C 465 nt2.82□□□□□ -1.96
CDC39P25655 INN1YNL152W 1230 nt2.82□□□□□ -1.96
CDC39P25655 TIP20YGL145W 2106 nt2.82□□□□□ -1.96
CDC39P25655 CDC10YCR002C 969 nt2.81□□□□□ -1.96
CDC39P25655 tF(GAA)DtF(GAA)D 73 nt2.81□□□□□ -1.96
CDC39P25655 tF(GAA)NtF(GAA)N 73 nt2.81□□□□□ -1.96
CDC39P25655 COS4YFL062W 1140 nt2.81□□□□□ -1.96
CDC39P25655 NSE1YLR007W 1011 nt2.81□□□□□ -1.96
CDC39P25655 YLR156WYLR156W 345 nt2.81□□□□□ -1.96
CDC39P25655 YLR159WYLR159W 345 nt2.81□□□□□ -1.96
CDC39P25655 YLR161WYLR161W 345 nt2.81□□□□□ -1.96
CDC39P25655 COX14YML129C 213 nt2.81□□□□□ -1.96
CDC39P25655 COS3YML132W 1140 nt2.81□□□□□ -1.96
CDC39P25655 MCK1YNL307C 1128 nt2.81□□□□□ -1.96
CDC39P25655 COS2YBR302C 1140 nt2.81□□□□□ -1.96
CDC39P25655 GZF3YJL110C 1656 nt2.81□□□□□ -1.96
CDC39P25655 EPL1YFL024C 2499 nt2.81□□□□□ -1.96
CDC39P25655 IBA57YJR122W 1494 nt2.81□□□□□ -1.96
CDC39P25655 RNR1YER070W 2667 nt2.81□□□□□ -1.96
CDC39P25655 YER133W-AYER133W-A 342 nt2.81□□□□□ -1.96
CDC39P25655 YLL017WYLL017W 312 nt2.81□□□□□ -1.96
CDC39P25655 RAD33YML011C 534 nt2.81□□□□□ -1.96
CDC39P25655 ATG21YPL100W 1491 nt2.81□□□□□ -1.96
CDC39P25655 BCK2YER167W 2556 nt2.8□□□□□ -1.96
CDC39P25655 SRB5YGR104C 924 nt2.8□□□□□ -1.96
CDC39P25655 CAP2YIL034C 864 nt2.8□□□□□ -1.96
CDC39P25655 GCD14YJL125C 1152 nt2.8□□□□□ -1.96
CDC39P25655 OSH2YDL019C 3852 nt2.8□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms