Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.24■□□□□ 0.99
PCNAP12004 AC241377.3-202ENST00000626088 1088 ntBASIC21.24■□□□□ 0.99
PCNAP12004 AC241585.3-202ENST00000628937 1088 ntBASIC21.24■□□□□ 0.99
PCNAP12004 AC245100.8-202ENST00000629247 1058 ntBASIC21.24■□□□□ 0.99
PCNAP12004 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCNAP12004 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCNAP12004 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCNAP12004 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCNAP12004 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCNAP12004 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCNAP12004 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCNAP12004 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.23■□□□□ 0.99
PCNAP12004 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 SRD5A1P1-201ENST00000442297 786 ntBASIC21.23■□□□□ 0.99
PCNAP12004 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.23■□□□□ 0.99
PCNAP12004 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 AC099791.2-201ENST00000605725 427 ntBASIC21.23■□□□□ 0.99
PCNAP12004 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.23■□□□□ 0.99
PCNAP12004 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.23■□□□□ 0.99
PCNAP12004 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.23■□□□□ 0.99
PCNAP12004 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNAP12004 PKD1P6-201ENST00000343738 4769 ntBASIC21.23■□□□□ 0.99
PCNAP12004 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCNAP12004 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.22■□□□□ 0.99
PCNAP12004 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.22■□□□□ 0.99
PCNAP12004 AC006455.2-201ENST00000429931 906 ntBASIC21.22■□□□□ 0.99
PCNAP12004 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.22■□□□□ 0.99
PCNAP12004 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.22■□□□□ 0.99
PCNAP12004 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 ESRRAP2-201ENST00000418437 1549 ntBASIC21.22■□□□□ 0.99
PCNAP12004 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCNAP12004 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNAP12004 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.22■□□□□ 0.99
PCNAP12004 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.21■□□□□ 0.99
PCNAP12004 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCNAP12004 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.21■□□□□ 0.99
PCNAP12004 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.21■□□□□ 0.99
PCNAP12004 AL512631.2-201ENST00000604634 923 ntBASIC21.21■□□□□ 0.99
PCNAP12004 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.21■□□□□ 0.99
PCNAP12004 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.21■□□□□ 0.99
PCNAP12004 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCNAP12004 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNAP12004 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNAP12004 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNAP12004 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCNAP12004 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNAP12004 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNAP12004 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.2■□□□□ 0.98
PCNAP12004 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.2■□□□□ 0.98
PCNAP12004 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNAP12004 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.2■□□□□ 0.98
PCNAP12004 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.2■□□□□ 0.98
PCNAP12004 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNAP12004 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.2■□□□□ 0.98
PCNAP12004 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PCNAP12004 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
PCNAP12004 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNAP12004 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.19■□□□□ 0.98
PCNAP12004 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCNAP12004 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.19■□□□□ 0.98
PCNAP12004 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.19■□□□□ 0.98
PCNAP12004 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.19■□□□□ 0.98
PCNAP12004 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCNAP12004 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.19■□□□□ 0.98
PCNAP12004 pRNA.6-201ENST00000610482 90 ntBASIC21.19■□□□□ 0.98
PCNAP12004 pRNA.5-201ENST00000612139 90 ntBASIC21.19■□□□□ 0.98
PCNAP12004 pRNA.11-201ENST00000618423 90 ntBASIC21.19■□□□□ 0.98
PCNAP12004 pRNA.13-201ENST00000619112 90 ntBASIC21.19■□□□□ 0.98
PCNAP12004 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.19■□□□□ 0.98
PCNAP12004 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms