Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SMIM18P0DKX4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SMIM18P0DKX4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.06■□□□□ 0.8
SMIM18P0DKX4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SMIM18P0DKX4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SMIM18P0DKX4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SMIM18P0DKX4 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 DUX4L29-201ENST00000425409 679 ntBASIC20.03■□□□□ 0.8
SMIM18P0DKX4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMIM18P0DKX4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMIM18P0DKX4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.02■□□□□ 0.8
SMIM18P0DKX4 AC087289.5-201ENST00000586076 3175 ntBASIC20.02■□□□□ 0.8
SMIM18P0DKX4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SMIM18P0DKX4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMIM18P0DKX4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMIM18P0DKX4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMIM18P0DKX4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.02■□□□□ 0.8
SMIM18P0DKX4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SMIM18P0DKX4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.02■□□□□ 0.79
SMIM18P0DKX4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 AFG3L1P-217ENST00000557444 2447 ntBASIC20.01■□□□□ 0.79
SMIM18P0DKX4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 LINC01971-201ENST00000617888 1048 ntBASIC20.01■□□□□ 0.79
SMIM18P0DKX4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SMIM18P0DKX4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SMIM18P0DKX4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SMIM18P0DKX4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms