Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.17■□□□□ 0.66
UBCP0CG48 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.17■□□□□ 0.66
UBCP0CG48 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UBCP0CG48 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UBCP0CG48 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.16■□□□□ 0.66
UBCP0CG48 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.16■□□□□ 0.66
UBCP0CG48 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
UBCP0CG48 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.16■□□□□ 0.66
UBCP0CG48 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
UBCP0CG48 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.16■□□□□ 0.66
UBCP0CG48 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.16■□□□□ 0.66
UBCP0CG48 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.16■□□□□ 0.66
UBCP0CG48 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
UBCP0CG48 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
UBCP0CG48 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.16■□□□□ 0.66
UBCP0CG48 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBCP0CG48 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UBCP0CG48 AC007375.3-201ENST00000600936 2314 ntBASIC19.16■□□□□ 0.66
UBCP0CG48 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBCP0CG48 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
UBCP0CG48 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBCP0CG48 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.15■□□□□ 0.66
UBCP0CG48 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBCP0CG48 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBCP0CG48 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
UBCP0CG48 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UBCP0CG48 KRT125P-201ENST00000546827 989 ntBASIC19.15■□□□□ 0.66
UBCP0CG48 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.15■□□□□ 0.66
UBCP0CG48 AC092028.1-203ENST00000608262 953 ntBASIC19.15■□□□□ 0.66
UBCP0CG48 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBCP0CG48 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.15■□□□□ 0.66
UBCP0CG48 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.15■□□□□ 0.66
UBCP0CG48 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UBCP0CG48 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UBCP0CG48 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBCP0CG48 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBCP0CG48 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
UBCP0CG48 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBCP0CG48 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBCP0CG48 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
UBCP0CG48 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBCP0CG48 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBCP0CG48 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.14■□□□□ 0.65
UBCP0CG48 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.14■□□□□ 0.65
UBCP0CG48 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.14■□□□□ 0.65
UBCP0CG48 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
UBCP0CG48 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBCP0CG48 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBCP0CG48 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
UBCP0CG48 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBCP0CG48 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.14■□□□□ 0.65
UBCP0CG48 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBCP0CG48 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.14■□□□□ 0.65
UBCP0CG48 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.14■□□□□ 0.65
UBCP0CG48 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.14■□□□□ 0.65
UBCP0CG48 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBCP0CG48 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBCP0CG48 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBCP0CG48 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.13■□□□□ 0.65
UBCP0CG48 Z92544.1-202ENST00000571933 1220 ntBASIC19.13■□□□□ 0.65
UBCP0CG48 MTDHP2-201ENST00000601468 714 ntBASIC19.13■□□□□ 0.65
UBCP0CG48 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBCP0CG48 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBCP0CG48 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
UBCP0CG48 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.13■□□□□ 0.65
UBCP0CG48 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBCP0CG48 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBCP0CG48 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBCP0CG48 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBCP0CG48 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.13■□□□□ 0.65
UBCP0CG48 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBCP0CG48 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
UBCP0CG48 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBCP0CG48 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBCP0CG48 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBCP0CG48 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBCP0CG48 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBCP0CG48 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBCP0CG48 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBCP0CG48 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBCP0CG48 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBCP0CG48 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBCP0CG48 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
UBCP0CG48 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBCP0CG48 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
UBCP0CG48 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.11■□□□□ 0.65
UBCP0CG48 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 AC009102.2-201ENST00000606772 1639 ntBASIC19.11■□□□□ 0.65
UBCP0CG48 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.11■□□□□ 0.65
UBCP0CG48 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.11■□□□□ 0.65
UBCP0CG48 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBCP0CG48 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms