Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDGFRBP09619 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PDGFRBP09619 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.35■■□□□ 1.33
PDGFRBP09619 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDGFRBP09619 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PDGFRBP09619 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.35■■□□□ 1.33
PDGFRBP09619 AL031602.1-201ENST00000633169 911 ntBASIC23.35■■□□□ 1.33
PDGFRBP09619 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.35■■□□□ 1.33
PDGFRBP09619 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PDGFRBP09619 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.34■■□□□ 1.33
PDGFRBP09619 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFRBP09619 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.34■■□□□ 1.33
PDGFRBP09619 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFRBP09619 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.34■■□□□ 1.33
PDGFRBP09619 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.34■■□□□ 1.33
PDGFRBP09619 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.34■■□□□ 1.33
PDGFRBP09619 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.34■■□□□ 1.33
PDGFRBP09619 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.34■■□□□ 1.33
PDGFRBP09619 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDGFRBP09619 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.33■■□□□ 1.33
PDGFRBP09619 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDGFRBP09619 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
PDGFRBP09619 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDGFRBP09619 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.33■■□□□ 1.33
PDGFRBP09619 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDGFRBP09619 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.33■■□□□ 1.33
PDGFRBP09619 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.33■■□□□ 1.33
PDGFRBP09619 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDGFRBP09619 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.33■■□□□ 1.33
PDGFRBP09619 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PDGFRBP09619 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.33■■□□□ 1.33
PDGFRBP09619 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.33■■□□□ 1.32
PDGFRBP09619 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
PDGFRBP09619 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDGFRBP09619 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDGFRBP09619 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDGFRBP09619 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PDGFRBP09619 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.32■■□□□ 1.32
PDGFRBP09619 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFRBP09619 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.32■■□□□ 1.32
PDGFRBP09619 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.32■■□□□ 1.32
PDGFRBP09619 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFRBP09619 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PDGFRBP09619 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFRBP09619 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.32■■□□□ 1.32
PDGFRBP09619 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.32■■□□□ 1.32
PDGFRBP09619 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFRBP09619 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.32■■□□□ 1.32
PDGFRBP09619 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFRBP09619 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDGFRBP09619 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PDGFRBP09619 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFRBP09619 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PDGFRBP09619 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
PDGFRBP09619 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.31■■□□□ 1.32
PDGFRBP09619 LINC01960-201ENST00000563759 1884 ntBASIC23.31■■□□□ 1.32
PDGFRBP09619 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.31■■□□□ 1.32
PDGFRBP09619 MIR572-201ENST00000384983 95 ntBASIC23.31■■□□□ 1.32
PDGFRBP09619 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.31■■□□□ 1.32
PDGFRBP09619 AC068587.7-201ENST00000641602 218 ntBASIC23.31■■□□□ 1.32
PDGFRBP09619 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFRBP09619 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.31■■□□□ 1.32
PDGFRBP09619 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PDGFRBP09619 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFRBP09619 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDGFRBP09619 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PDGFRBP09619 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.3■■□□□ 1.32
PDGFRBP09619 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.3■■□□□ 1.32
PDGFRBP09619 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PDGFRBP09619 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.3■■□□□ 1.32
PDGFRBP09619 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.3■■□□□ 1.32
PDGFRBP09619 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PDGFRBP09619 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.3■■□□□ 1.32
PDGFRBP09619 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDGFRBP09619 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.3■■□□□ 1.32
PDGFRBP09619 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PDGFRBP09619 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDGFRBP09619 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDGFRBP09619 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PDGFRBP09619 AC010141.3-201ENST00000456659 717 ntBASIC23.29■■□□□ 1.32
PDGFRBP09619 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.29■■□□□ 1.32
PDGFRBP09619 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDGFRBP09619 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.28■■□□□ 1.32
PDGFRBP09619 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFRBP09619 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PDGFRBP09619 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFRBP09619 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFRBP09619 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFRBP09619 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFRBP09619 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.28■■□□□ 1.32
PDGFRBP09619 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDGFRBP09619 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms