Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.28□□□□□ -0.12
PKHD1P08F94 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.28□□□□□ -0.12
PKHD1P08F94 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PKHD1P08F94 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC14.28□□□□□ -0.12
PKHD1P08F94 AC142086.6-201ENST00000621154 1765 ntBASIC14.28□□□□□ -0.12
PKHD1P08F94 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.28□□□□□ -0.12
PKHD1P08F94 AC144652.1-201ENST00000609974 1624 ntBASIC14.28□□□□□ -0.12
PKHD1P08F94 ALDH1A3-203ENST00000557963 1670 ntBASIC14.28□□□□□ -0.12
PKHD1P08F94 LSR-205ENST00000427250 1606 ntTSL 2 BASIC14.28□□□□□ -0.12
PKHD1P08F94 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PKHD1P08F94 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC14.27□□□□□ -0.12
PKHD1P08F94 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PKHD1P08F94 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PKHD1P08F94 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.27□□□□□ -0.12
PKHD1P08F94 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PKHD1P08F94 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PKHD1P08F94 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PKHD1P08F94 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PKHD1P08F94 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.27□□□□□ -0.12
PKHD1P08F94 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PKHD1P08F94 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.27□□□□□ -0.12
PKHD1P08F94 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.27□□□□□ -0.13
PKHD1P08F94 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.27□□□□□ -0.13
PKHD1P08F94 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PKHD1P08F94 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.27□□□□□ -0.13
PKHD1P08F94 AC211429.1-201ENST00000415277 523 ntBASIC14.27□□□□□ -0.13
PKHD1P08F94 AC128676.1-201ENST00000454392 318 ntBASIC14.27□□□□□ -0.13
PKHD1P08F94 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.27□□□□□ -0.13
PKHD1P08F94 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PKHD1P08F94 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.26□□□□□ -0.13
PKHD1P08F94 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.26□□□□□ -0.13
PKHD1P08F94 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.26□□□□□ -0.13
PKHD1P08F94 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PKHD1P08F94 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC14.26□□□□□ -0.13
PKHD1P08F94 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PKHD1P08F94 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PKHD1P08F94 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.26□□□□□ -0.13
PKHD1P08F94 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKHD1P08F94 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.25□□□□□ -0.13
PKHD1P08F94 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PKHD1P08F94 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKHD1P08F94 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PKHD1P08F94 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PKHD1P08F94 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PKHD1P08F94 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKHD1P08F94 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PKHD1P08F94 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PKHD1P08F94 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.25□□□□□ -0.13
PKHD1P08F94 RARRES2P4-201ENST00000514074 484 ntBASIC14.25□□□□□ -0.13
PKHD1P08F94 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.25□□□□□ -0.13
PKHD1P08F94 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.25□□□□□ -0.13
PKHD1P08F94 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PKHD1P08F94 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.24□□□□□ -0.13
PKHD1P08F94 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.24□□□□□ -0.13
PKHD1P08F94 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.24□□□□□ -0.13
PKHD1P08F94 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.24□□□□□ -0.13
PKHD1P08F94 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PKHD1P08F94 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PKHD1P08F94 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PKHD1P08F94 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PKHD1P08F94 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.23□□□□□ -0.13
PKHD1P08F94 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.23□□□□□ -0.13
PKHD1P08F94 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.23□□□□□ -0.13
PKHD1P08F94 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.23□□□□□ -0.13
PKHD1P08F94 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PKHD1P08F94 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PKHD1P08F94 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PKHD1P08F94 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
PKHD1P08F94 AC007322.1-201ENST00000426983 750 ntBASIC14.23□□□□□ -0.13
PKHD1P08F94 ECEL1P3-201ENST00000427961 737 ntBASIC14.23□□□□□ -0.13
PKHD1P08F94 FAM210CP-201ENST00000445714 574 ntBASIC14.23□□□□□ -0.13
PKHD1P08F94 UNC93B4-201ENST00000505679 747 ntBASIC14.23□□□□□ -0.13
PKHD1P08F94 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PKHD1P08F94 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.23□□□□□ -0.13
PKHD1P08F94 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC14.23□□□□□ -0.13
PKHD1P08F94 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC14.23□□□□□ -0.13
PKHD1P08F94 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PKHD1P08F94 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.23□□□□□ -0.13
PKHD1P08F94 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PKHD1P08F94 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.23□□□□□ -0.13
PKHD1P08F94 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PKHD1P08F94 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.22□□□□□ -0.13
PKHD1P08F94 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.22□□□□□ -0.13
PKHD1P08F94 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms