Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.98■□□□□ 0.63
NGFP01138 AC106739.1-201ENST00000617035 715 ntBASIC18.98■□□□□ 0.63
NGFP01138 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
NGFP01138 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NGFP01138 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NGFP01138 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NGFP01138 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NGFP01138 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NGFP01138 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 AC087742.1-201ENST00000575880 1738 ntBASIC18.97■□□□□ 0.63
NGFP01138 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.97■□□□□ 0.63
NGFP01138 AC233723.2-201ENST00000623798 2106 ntBASIC18.97■□□□□ 0.63
NGFP01138 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.97■□□□□ 0.63
NGFP01138 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.97■□□□□ 0.63
NGFP01138 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
NGFP01138 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NGFP01138 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NGFP01138 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NGFP01138 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NGFP01138 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NGFP01138 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.96■□□□□ 0.63
NGFP01138 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.96■□□□□ 0.63
NGFP01138 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NGFP01138 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NGFP01138 SLC47A1P1-202ENST00000449666 945 ntBASIC18.96■□□□□ 0.63
NGFP01138 OR2I1P-207ENST00000453522 948 ntBASIC18.96■□□□□ 0.63
NGFP01138 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.96■□□□□ 0.63
NGFP01138 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.96■□□□□ 0.63
NGFP01138 AL139246.5-201ENST00000606645 996 ntBASIC18.96■□□□□ 0.63
NGFP01138 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.96■□□□□ 0.63
NGFP01138 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.96■□□□□ 0.63
NGFP01138 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NGFP01138 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NGFP01138 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.96■□□□□ 0.63
NGFP01138 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NGFP01138 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.96■□□□□ 0.63
NGFP01138 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NGFP01138 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NGFP01138 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NGFP01138 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NGFP01138 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.95■□□□□ 0.62
NGFP01138 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NGFP01138 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NGFP01138 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NGFP01138 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.95■□□□□ 0.62
NGFP01138 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NGFP01138 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.95■□□□□ 0.62
NGFP01138 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.95■□□□□ 0.62
NGFP01138 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NGFP01138 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
NGFP01138 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NGFP01138 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NGFP01138 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NGFP01138 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NGFP01138 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.93■□□□□ 0.62
NGFP01138 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NGFP01138 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.93■□□□□ 0.62
NGFP01138 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.93■□□□□ 0.62
NGFP01138 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.93■□□□□ 0.62
NGFP01138 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.93■□□□□ 0.62
NGFP01138 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NGFP01138 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
NGFP01138 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NGFP01138 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NGFP01138 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NGFP01138 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NGFP01138 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NGFP01138 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NGFP01138 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NGFP01138 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NGFP01138 ESRRAP2-201ENST00000418437 1549 ntBASIC18.92■□□□□ 0.62
NGFP01138 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.92■□□□□ 0.62
NGFP01138 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NGFP01138 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.92■□□□□ 0.62
NGFP01138 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.92■□□□□ 0.62
NGFP01138 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
NGFP01138 AL031602.1-201ENST00000633169 911 ntBASIC18.92■□□□□ 0.62
NGFP01138 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.92■□□□□ 0.62
NGFP01138 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NGFP01138 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NGFP01138 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NGFP01138 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NGFP01138 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NGFP01138 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms