Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLN5O75503 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLN5O75503 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CLN5O75503 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.74■□□□□ 0.43
CLN5O75503 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.73■□□□□ 0.43
CLN5O75503 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.73■□□□□ 0.43
CLN5O75503 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CLN5O75503 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLN5O75503 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLN5O75503 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.73■□□□□ 0.43
CLN5O75503 THA1P-201ENST00000590384 1145 ntBASIC17.73■□□□□ 0.43
CLN5O75503 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.73■□□□□ 0.43
CLN5O75503 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CLN5O75503 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLN5O75503 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLN5O75503 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.73■□□□□ 0.43
CLN5O75503 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CLN5O75503 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLN5O75503 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CLN5O75503 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.72■□□□□ 0.43
CLN5O75503 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.72■□□□□ 0.43
CLN5O75503 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLN5O75503 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.72■□□□□ 0.43
CLN5O75503 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CLN5O75503 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLN5O75503 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 PVT1_1.1-201ENST00000615125 194 ntBASIC17.71■□□□□ 0.43
CLN5O75503 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLN5O75503 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLN5O75503 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CLN5O75503 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
CLN5O75503 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CLN5O75503 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLN5O75503 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLN5O75503 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.7■□□□□ 0.42
CLN5O75503 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.7■□□□□ 0.42
CLN5O75503 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.7■□□□□ 0.42
CLN5O75503 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.7■□□□□ 0.42
CLN5O75503 MIR4281-201ENST00000580852 62 ntBASIC17.7■□□□□ 0.42
CLN5O75503 AC010980.1-201ENST00000587192 1142 ntBASIC17.7■□□□□ 0.42
CLN5O75503 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.7■□□□□ 0.42
CLN5O75503 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLN5O75503 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLN5O75503 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLN5O75503 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLN5O75503 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLN5O75503 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLN5O75503 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLN5O75503 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLN5O75503 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.69■□□□□ 0.42
CLN5O75503 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.69■□□□□ 0.42
CLN5O75503 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLN5O75503 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.69■□□□□ 0.42
CLN5O75503 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.69■□□□□ 0.42
CLN5O75503 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.69■□□□□ 0.42
CLN5O75503 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.69■□□□□ 0.42
CLN5O75503 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLN5O75503 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLN5O75503 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.69■□□□□ 0.42
CLN5O75503 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLN5O75503 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLN5O75503 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLN5O75503 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLN5O75503 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLN5O75503 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLN5O75503 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLN5O75503 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.68■□□□□ 0.42
CLN5O75503 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.68■□□□□ 0.42
CLN5O75503 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.68■□□□□ 0.42
CLN5O75503 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.68■□□□□ 0.42
CLN5O75503 AF131216.4-201ENST00000638924 1588 ntBASIC17.68■□□□□ 0.42
CLN5O75503 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLN5O75503 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLN5O75503 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms