Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.61■■□□□ 1.05
SUPT3HO75486 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
SUPT3HO75486 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.61■■□□□ 1.05
SUPT3HO75486 MIR6724-1-201ENST00000616420 92 ntBASIC21.61■■□□□ 1.05
SUPT3HO75486 MIR6724-2-201ENST00000616483 92 ntBASIC21.61■■□□□ 1.05
SUPT3HO75486 MIR6724-4-201ENST00000617390 92 ntBASIC21.61■■□□□ 1.05
SUPT3HO75486 MIR6724-3-201ENST00000622482 92 ntBASIC21.61■■□□□ 1.05
SUPT3HO75486 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SUPT3HO75486 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SUPT3HO75486 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SUPT3HO75486 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SUPT3HO75486 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SUPT3HO75486 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SUPT3HO75486 AC004687.1-201ENST00000579003 1625 ntBASIC21.6■■□□□ 1.05
SUPT3HO75486 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SUPT3HO75486 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SUPT3HO75486 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SUPT3HO75486 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.6■■□□□ 1.05
SUPT3HO75486 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SUPT3HO75486 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
SUPT3HO75486 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SUPT3HO75486 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SUPT3HO75486 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SUPT3HO75486 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.6■■□□□ 1.05
SUPT3HO75486 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SUPT3HO75486 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
SUPT3HO75486 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SUPT3HO75486 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.59■■□□□ 1.05
SUPT3HO75486 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.59■■□□□ 1.05
SUPT3HO75486 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.59■■□□□ 1.05
SUPT3HO75486 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
SUPT3HO75486 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SUPT3HO75486 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SUPT3HO75486 KRT16P3-201ENST00000439127 1283 ntBASIC21.59■■□□□ 1.05
SUPT3HO75486 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.59■■□□□ 1.05
SUPT3HO75486 LINC01960-201ENST00000563759 1884 ntBASIC21.59■■□□□ 1.05
SUPT3HO75486 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SUPT3HO75486 AC139530.1-201ENST00000575312 1977 ntBASIC21.59■■□□□ 1.05
SUPT3HO75486 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SUPT3HO75486 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SUPT3HO75486 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SUPT3HO75486 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SUPT3HO75486 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SUPT3HO75486 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SUPT3HO75486 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SUPT3HO75486 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SUPT3HO75486 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.58■■□□□ 1.05
SUPT3HO75486 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SUPT3HO75486 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SUPT3HO75486 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SUPT3HO75486 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.58■■□□□ 1.05
SUPT3HO75486 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SUPT3HO75486 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.58■■□□□ 1.04
SUPT3HO75486 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SUPT3HO75486 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SUPT3HO75486 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SUPT3HO75486 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
SUPT3HO75486 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SUPT3HO75486 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SUPT3HO75486 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.57■■□□□ 1.04
SUPT3HO75486 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
SUPT3HO75486 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.57■■□□□ 1.04
SUPT3HO75486 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.57■■□□□ 1.04
SUPT3HO75486 AL035685.1-201ENST00000636663 812 ntBASIC21.57■■□□□ 1.04
SUPT3HO75486 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.57■■□□□ 1.04
SUPT3HO75486 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SUPT3HO75486 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SUPT3HO75486 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SUPT3HO75486 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SUPT3HO75486 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SUPT3HO75486 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SUPT3HO75486 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SUPT3HO75486 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.56■■□□□ 1.04
SUPT3HO75486 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SUPT3HO75486 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.56■■□□□ 1.04
SUPT3HO75486 AL117332.1-201ENST00000622628 974 ntBASIC21.56■■□□□ 1.04
SUPT3HO75486 AC092053.2-201ENST00000640557 1818 ntBASIC21.56■■□□□ 1.04
SUPT3HO75486 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SUPT3HO75486 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SUPT3HO75486 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SUPT3HO75486 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SUPT3HO75486 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SUPT3HO75486 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SUPT3HO75486 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SUPT3HO75486 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SUPT3HO75486 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms