Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.38■■□□□ 1.01
NPHS1O60500 AC026310.3-201ENST00000625186 2373 ntBASIC21.38■■□□□ 1.01
NPHS1O60500 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.38■■□□□ 1.01
NPHS1O60500 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NPHS1O60500 AC009102.2-201ENST00000606772 1639 ntBASIC21.37■■□□□ 1.01
NPHS1O60500 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.37■■□□□ 1.01
NPHS1O60500 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHS1O60500 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
NPHS1O60500 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.37■■□□□ 1.01
NPHS1O60500 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.37■■□□□ 1.01
NPHS1O60500 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHS1O60500 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NPHS1O60500 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NPHS1O60500 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.37■■□□□ 1.01
NPHS1O60500 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.36■■□□□ 1.01
NPHS1O60500 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHS1O60500 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.36■■□□□ 1.01
NPHS1O60500 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHS1O60500 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.36■■□□□ 1.01
NPHS1O60500 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
NPHS1O60500 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NPHS1O60500 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHS1O60500 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHS1O60500 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.36■■□□□ 1.01
NPHS1O60500 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHS1O60500 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
NPHS1O60500 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NPHS1O60500 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHS1O60500 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.36■■□□□ 1.01
NPHS1O60500 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.36■■□□□ 1.01
NPHS1O60500 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NPHS1O60500 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
NPHS1O60500 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NPHS1O60500 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.35■■□□□ 1.01
NPHS1O60500 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.35■■□□□ 1.01
NPHS1O60500 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NPHS1O60500 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.34■■□□□ 1.01
NPHS1O60500 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.34■■□□□ 1.01
NPHS1O60500 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NPHS1O60500 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
NPHS1O60500 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.34■■□□□ 1.01
NPHS1O60500 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 AC092028.1-203ENST00000608262 953 ntBASIC21.34■■□□□ 1.01
NPHS1O60500 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NPHS1O60500 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPHS1O60500 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NPHS1O60500 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
NPHS1O60500 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPHS1O60500 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPHS1O60500 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NPHS1O60500 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NPHS1O60500 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
NPHS1O60500 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
NPHS1O60500 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.32■■□□□ 1
NPHS1O60500 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.32■■□□□ 1
NPHS1O60500 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHS1O60500 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHS1O60500 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.32■■□□□ 1
NPHS1O60500 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.32■■□□□ 1
NPHS1O60500 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.32■■□□□ 1
NPHS1O60500 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
NPHS1O60500 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.32■■□□□ 1
NPHS1O60500 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.32■■□□□ 1
NPHS1O60500 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHS1O60500 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPHS1O60500 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
NPHS1O60500 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.31■■□□□ 1
NPHS1O60500 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.31■■□□□ 1
NPHS1O60500 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.31■■□□□ 1
NPHS1O60500 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.31■■□□□ 1
NPHS1O60500 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
NPHS1O60500 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPHS1O60500 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
NPHS1O60500 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NPHS1O60500 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.3■■□□□ 1
NPHS1O60500 C17orf82-201ENST00000623772 1530 ntBASIC21.3■■□□□ 1
NPHS1O60500 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms