Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCMT2O60294 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCMT2O60294 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.99■□□□□ 0.95
LCMT2O60294 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.99■□□□□ 0.95
LCMT2O60294 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.99■□□□□ 0.95
LCMT2O60294 AC233992.3-201ENST00000607491 485 ntBASIC20.99■□□□□ 0.95
LCMT2O60294 AC005837.3-201ENST00000612163 286 ntBASIC20.99■□□□□ 0.95
LCMT2O60294 AL136967.2-201ENST00000623968 743 ntBASIC20.99■□□□□ 0.95
LCMT2O60294 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LCMT2O60294 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.99■□□□□ 0.95
LCMT2O60294 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCMT2O60294 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCMT2O60294 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LCMT2O60294 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LCMT2O60294 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCMT2O60294 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCMT2O60294 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCMT2O60294 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LCMT2O60294 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCMT2O60294 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LCMT2O60294 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCMT2O60294 AP001330.3-201ENST00000520123 633 ntBASIC20.98■□□□□ 0.95
LCMT2O60294 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.98■□□□□ 0.95
LCMT2O60294 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.98■□□□□ 0.95
LCMT2O60294 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.98■□□□□ 0.95
LCMT2O60294 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCMT2O60294 AC012676.1-201ENST00000574705 1949 ntBASIC20.98■□□□□ 0.95
LCMT2O60294 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCMT2O60294 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LCMT2O60294 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCMT2O60294 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCMT2O60294 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
LCMT2O60294 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LCMT2O60294 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LCMT2O60294 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCMT2O60294 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.97■□□□□ 0.95
LCMT2O60294 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCMT2O60294 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCMT2O60294 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCMT2O60294 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.97■□□□□ 0.95
LCMT2O60294 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LCMT2O60294 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LCMT2O60294 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LCMT2O60294 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.97■□□□□ 0.95
LCMT2O60294 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.96■□□□□ 0.95
LCMT2O60294 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LCMT2O60294 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCMT2O60294 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCMT2O60294 MIR939-201ENST00000401314 82 ntBASIC20.96■□□□□ 0.95
LCMT2O60294 AC099791.1-201ENST00000416440 715 ntBASIC20.96■□□□□ 0.95
LCMT2O60294 AF213884.3-201ENST00000563833 479 ntBASIC20.96■□□□□ 0.95
LCMT2O60294 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCMT2O60294 AC233723.2-201ENST00000623798 2106 ntBASIC20.96■□□□□ 0.95
LCMT2O60294 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCMT2O60294 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
LCMT2O60294 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCMT2O60294 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.95■□□□□ 0.95
LCMT2O60294 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LCMT2O60294 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCMT2O60294 ESRRAP2-201ENST00000418437 1549 ntBASIC20.95■□□□□ 0.94
LCMT2O60294 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCMT2O60294 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.95■□□□□ 0.94
LCMT2O60294 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LCMT2O60294 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.95■□□□□ 0.94
LCMT2O60294 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCMT2O60294 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
LCMT2O60294 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCMT2O60294 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCMT2O60294 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.94■□□□□ 0.94
LCMT2O60294 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCMT2O60294 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LCMT2O60294 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCMT2O60294 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.94■□□□□ 0.94
LCMT2O60294 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LCMT2O60294 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LCMT2O60294 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LCMT2O60294 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCMT2O60294 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
LCMT2O60294 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LCMT2O60294 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.93■□□□□ 0.94
LCMT2O60294 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.93■□□□□ 0.94
LCMT2O60294 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.93■□□□□ 0.94
LCMT2O60294 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.93■□□□□ 0.94
LCMT2O60294 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LCMT2O60294 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCMT2O60294 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCMT2O60294 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCMT2O60294 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.92■□□□□ 0.94
LCMT2O60294 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LCMT2O60294 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LCMT2O60294 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms