Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC28A2O43868 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC28A2O43868 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC28A2O43868 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.01■□□□□ 0.95
SLC28A2O43868 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SLC28A2O43868 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC28A2O43868 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC28A2O43868 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC28A2O43868 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC28A2O43868 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SLC28A2O43868 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC28A2O43868 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21■□□□□ 0.95
SLC28A2O43868 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC28A2O43868 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC28A2O43868 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC28A2O43868 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC28A2O43868 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
SLC28A2O43868 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC28A2O43868 ABHD17AP1-201ENST00000358206 933 ntBASIC21■□□□□ 0.95
SLC28A2O43868 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC28A2O43868 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21■□□□□ 0.95
SLC28A2O43868 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC28A2O43868 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SLC28A2O43868 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC28A2O43868 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SLC28A2O43868 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC28A2O43868 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC28A2O43868 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC28A2O43868 AC233992.3-201ENST00000607491 485 ntBASIC20.99■□□□□ 0.95
SLC28A2O43868 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SLC28A2O43868 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC28A2O43868 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC28A2O43868 AC245100.8-202ENST00000629247 1058 ntBASIC20.99■□□□□ 0.95
SLC28A2O43868 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC28A2O43868 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC28A2O43868 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC28A2O43868 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC28A2O43868 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC28A2O43868 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC28A2O43868 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC28A2O43868 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC28A2O43868 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC28A2O43868 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC28A2O43868 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC28A2O43868 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC28A2O43868 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.98■□□□□ 0.95
SLC28A2O43868 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC28A2O43868 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
SLC28A2O43868 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC28A2O43868 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC28A2O43868 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC28A2O43868 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC28A2O43868 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC28A2O43868 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SLC28A2O43868 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC28A2O43868 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC28A2O43868 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SLC28A2O43868 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC28A2O43868 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC28A2O43868 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC28A2O43868 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC28A2O43868 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC28A2O43868 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC28A2O43868 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC28A2O43868 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SLC28A2O43868 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC28A2O43868 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC28A2O43868 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC28A2O43868 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC28A2O43868 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC28A2O43868 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC28A2O43868 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC28A2O43868 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC28A2O43868 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.96■□□□□ 0.95
SLC28A2O43868 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.96■□□□□ 0.95
SLC28A2O43868 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC28A2O43868 AC079630.1-202ENST00000618127 1840 ntBASIC20.96■□□□□ 0.95
SLC28A2O43868 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC28A2O43868 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SLC28A2O43868 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC28A2O43868 C1orf229-201ENST00000623686 2258 ntBASIC20.95■□□□□ 0.95
SLC28A2O43868 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SLC28A2O43868 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC28A2O43868 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A2O43868 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A2O43868 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC28A2O43868 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC28A2O43868 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A2O43868 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms