Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN6O43657 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN6O43657 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN6O43657 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN6O43657 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.92■■□□□ 1.1
TSPAN6O43657 AC010141.3-201ENST00000456659 717 ntBASIC21.92■■□□□ 1.1
TSPAN6O43657 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.92■■□□□ 1.1
TSPAN6O43657 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.92■■□□□ 1.1
TSPAN6O43657 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN6O43657 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TSPAN6O43657 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.92■■□□□ 1.1
TSPAN6O43657 DUSP8P3-201ENST00000399571 1760 ntBASIC21.92■■□□□ 1.1
TSPAN6O43657 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN6O43657 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.91■■□□□ 1.1
TSPAN6O43657 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN6O43657 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TSPAN6O43657 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.91■■□□□ 1.1
TSPAN6O43657 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.91■■□□□ 1.1
TSPAN6O43657 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.91■■□□□ 1.1
TSPAN6O43657 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TSPAN6O43657 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.91■■□□□ 1.1
TSPAN6O43657 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.91■■□□□ 1.1
TSPAN6O43657 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.91■■□□□ 1.1
TSPAN6O43657 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN6O43657 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TSPAN6O43657 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.91■■□□□ 1.1
TSPAN6O43657 DUSP8P5-201ENST00000422884 1815 ntBASIC21.91■■□□□ 1.1
TSPAN6O43657 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TSPAN6O43657 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TSPAN6O43657 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN6O43657 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN6O43657 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN6O43657 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TSPAN6O43657 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TSPAN6O43657 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.9■■□□□ 1.1
TSPAN6O43657 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TSPAN6O43657 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN6O43657 AC034268.1-201ENST00000441047 882 ntBASIC21.9■■□□□ 1.1
TSPAN6O43657 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.9■■□□□ 1.1
TSPAN6O43657 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.9■■□□□ 1.1
TSPAN6O43657 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN6O43657 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN6O43657 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN6O43657 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
TSPAN6O43657 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TSPAN6O43657 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TSPAN6O43657 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN6O43657 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.89■■□□□ 1.09
TSPAN6O43657 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
TSPAN6O43657 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.89■■□□□ 1.09
TSPAN6O43657 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN6O43657 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.89■■□□□ 1.09
TSPAN6O43657 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.89■■□□□ 1.09
TSPAN6O43657 AL162430.1-201ENST00000480705 870 ntBASIC21.89■■□□□ 1.09
TSPAN6O43657 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.89■■□□□ 1.09
TSPAN6O43657 AC104564.3-201ENST00000582367 638 ntBASIC21.89■■□□□ 1.09
TSPAN6O43657 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN6O43657 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TSPAN6O43657 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.89■■□□□ 1.09
TSPAN6O43657 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.89■■□□□ 1.09
TSPAN6O43657 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TSPAN6O43657 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.88■■□□□ 1.09
TSPAN6O43657 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.88■■□□□ 1.09
TSPAN6O43657 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.88■■□□□ 1.09
TSPAN6O43657 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TSPAN6O43657 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.88■■□□□ 1.09
TSPAN6O43657 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.88■■□□□ 1.09
TSPAN6O43657 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.88■■□□□ 1.09
TSPAN6O43657 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.88■■□□□ 1.09
TSPAN6O43657 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TSPAN6O43657 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TSPAN6O43657 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.88■■□□□ 1.09
TSPAN6O43657 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TSPAN6O43657 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TSPAN6O43657 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.87■■□□□ 1.09
TSPAN6O43657 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.87■■□□□ 1.09
TSPAN6O43657 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.87■■□□□ 1.09
TSPAN6O43657 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN6O43657 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN6O43657 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN6O43657 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN6O43657 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.86■■□□□ 1.09
TSPAN6O43657 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN6O43657 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.86■■□□□ 1.09
TSPAN6O43657 AC092666.2-201ENST00000613287 246 ntBASIC21.86■■□□□ 1.09
TSPAN6O43657 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN6O43657 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN6O43657 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN6O43657 LINC02228-203ENST00000641970 1355 ntBASIC21.86■■□□□ 1.09
TSPAN6O43657 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms