Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.83■□□□□ 0.61
LYRM1O43325 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.83■□□□□ 0.61
LYRM1O43325 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LYRM1O43325 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYRM1O43325 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYRM1O43325 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LYRM1O43325 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LYRM1O43325 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.83■□□□□ 0.6
LYRM1O43325 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.82■□□□□ 0.6
LYRM1O43325 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 AF106564.1-201ENST00000607058 2553 ntBASIC18.82■□□□□ 0.6
LYRM1O43325 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 AL162393.1-201ENST00000437852 946 ntBASIC18.82■□□□□ 0.6
LYRM1O43325 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LYRM1O43325 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LYRM1O43325 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LYRM1O43325 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
LYRM1O43325 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.81■□□□□ 0.6
LYRM1O43325 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LYRM1O43325 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LYRM1O43325 LINC01006-201ENST00000333319 2292 ntBASIC18.8■□□□□ 0.6
LYRM1O43325 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.8■□□□□ 0.6
LYRM1O43325 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LYRM1O43325 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYRM1O43325 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYRM1O43325 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LYRM1O43325 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.8■□□□□ 0.6
LYRM1O43325 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LYRM1O43325 FEM1AP4-201ENST00000443167 1987 ntBASIC18.8■□□□□ 0.6
LYRM1O43325 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LYRM1O43325 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.8■□□□□ 0.6
LYRM1O43325 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LYRM1O43325 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
LYRM1O43325 Z98882.1-201ENST00000622160 2253 ntBASIC18.8■□□□□ 0.6
LYRM1O43325 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYRM1O43325 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LYRM1O43325 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LYRM1O43325 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM1O43325 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM1O43325 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM1O43325 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.79■□□□□ 0.6
LYRM1O43325 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM1O43325 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
LYRM1O43325 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LYRM1O43325 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM1O43325 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.79■□□□□ 0.6
LYRM1O43325 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM1O43325 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM1O43325 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.79■□□□□ 0.6
LYRM1O43325 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LYRM1O43325 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.78■□□□□ 0.6
LYRM1O43325 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYRM1O43325 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.78■□□□□ 0.6
LYRM1O43325 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYRM1O43325 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYRM1O43325 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
LYRM1O43325 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYRM1O43325 RP9P-202ENST00000450133 1212 ntBASIC18.78■□□□□ 0.6
LYRM1O43325 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.78■□□□□ 0.6
LYRM1O43325 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.78■□□□□ 0.6
LYRM1O43325 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LYRM1O43325 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYRM1O43325 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.78■□□□□ 0.6
LYRM1O43325 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYRM1O43325 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYRM1O43325 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYRM1O43325 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYRM1O43325 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYRM1O43325 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYRM1O43325 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYRM1O43325 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYRM1O43325 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYRM1O43325 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.76■□□□□ 0.59
LYRM1O43325 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYRM1O43325 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.76■□□□□ 0.59
LYRM1O43325 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYRM1O43325 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.76■□□□□ 0.59
LYRM1O43325 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.76■□□□□ 0.59
LYRM1O43325 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.76■□□□□ 0.59
LYRM1O43325 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYRM1O43325 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.76■□□□□ 0.59
LYRM1O43325 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms