Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-8O15522 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.41■□□□□ 0.86
NKX2-8O15522 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.41■□□□□ 0.86
NKX2-8O15522 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.41■□□□□ 0.86
NKX2-8O15522 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.41■□□□□ 0.86
NKX2-8O15522 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.41■□□□□ 0.86
NKX2-8O15522 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-8O15522 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-8O15522 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.41■□□□□ 0.86
NKX2-8O15522 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NKX2-8O15522 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX2-8O15522 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX2-8O15522 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
NKX2-8O15522 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NKX2-8O15522 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.4■□□□□ 0.86
NKX2-8O15522 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NKX2-8O15522 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.4■□□□□ 0.86
NKX2-8O15522 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.4■□□□□ 0.86
NKX2-8O15522 NCF1B-203ENST00000435988 1254 ntBASIC20.4■□□□□ 0.86
NKX2-8O15522 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NKX2-8O15522 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
NKX2-8O15522 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.4■□□□□ 0.86
NKX2-8O15522 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.4■□□□□ 0.86
NKX2-8O15522 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
NKX2-8O15522 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.39■□□□□ 0.86
NKX2-8O15522 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
NKX2-8O15522 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.39■□□□□ 0.85
NKX2-8O15522 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NKX2-8O15522 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
NKX2-8O15522 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NKX2-8O15522 AC079140.4-201ENST00000507448 529 ntBASIC20.39■□□□□ 0.85
NKX2-8O15522 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.39■□□□□ 0.85
NKX2-8O15522 AL353803.4-201ENST00000565882 1934 ntBASIC20.39■□□□□ 0.85
NKX2-8O15522 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NKX2-8O15522 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX2-8O15522 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NKX2-8O15522 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX2-8O15522 ABHD17AP1-201ENST00000358206 933 ntBASIC20.38■□□□□ 0.85
NKX2-8O15522 MIR663A-201ENST00000385250 93 ntBASIC20.38■□□□□ 0.85
NKX2-8O15522 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.38■□□□□ 0.85
NKX2-8O15522 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX2-8O15522 KRT18P11-201ENST00000435214 1283 ntBASIC20.38■□□□□ 0.85
NKX2-8O15522 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.38■□□□□ 0.85
NKX2-8O15522 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.38■□□□□ 0.85
NKX2-8O15522 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.38■□□□□ 0.85
NKX2-8O15522 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NKX2-8O15522 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.38■□□□□ 0.85
NKX2-8O15522 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX2-8O15522 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NKX2-8O15522 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NKX2-8O15522 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NKX2-8O15522 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NKX2-8O15522 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NKX2-8O15522 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NKX2-8O15522 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.37■□□□□ 0.85
NKX2-8O15522 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NKX2-8O15522 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.36■□□□□ 0.85
NKX2-8O15522 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NKX2-8O15522 GPX1P1-201ENST00000388829 606 ntBASIC20.36■□□□□ 0.85
NKX2-8O15522 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.36■□□□□ 0.85
NKX2-8O15522 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.36■□□□□ 0.85
NKX2-8O15522 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.36■□□□□ 0.85
NKX2-8O15522 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NKX2-8O15522 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.36■□□□□ 0.85
NKX2-8O15522 OXCT2P1-201ENST00000447263 1535 ntBASIC20.36■□□□□ 0.85
NKX2-8O15522 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NKX2-8O15522 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.36■□□□□ 0.85
NKX2-8O15522 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NKX2-8O15522 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NKX2-8O15522 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NKX2-8O15522 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NKX2-8O15522 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.35■□□□□ 0.85
NKX2-8O15522 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.35■□□□□ 0.85
NKX2-8O15522 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.35■□□□□ 0.85
NKX2-8O15522 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NKX2-8O15522 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NKX2-8O15522 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NKX2-8O15522 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NKX2-8O15522 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.34■□□□□ 0.85
NKX2-8O15522 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-8O15522 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-8O15522 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-8O15522 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-8O15522 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-8O15522 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-8O15522 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NKX2-8O15522 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.34■□□□□ 0.85
NKX2-8O15522 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.34■□□□□ 0.85
NKX2-8O15522 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NKX2-8O15522 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.33■□□□□ 0.85
NKX2-8O15522 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-8O15522 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
NKX2-8O15522 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NKX2-8O15522 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.33■□□□□ 0.84
NKX2-8O15522 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NKX2-8O15522 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NKX2-8O15522 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-8O15522 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.32■□□□□ 0.84
NKX2-8O15522 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NKX2-8O15522 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms