Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.2■□□□□ 0.98
SDHDO14521 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SDHDO14521 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SDHDO14521 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.19■□□□□ 0.98
SDHDO14521 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 KRT8P33-201ENST00000508125 1423 ntBASIC21.19■□□□□ 0.98
SDHDO14521 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.19■□□□□ 0.98
SDHDO14521 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SDHDO14521 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHDO14521 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHDO14521 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHDO14521 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.18■□□□□ 0.98
SDHDO14521 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHDO14521 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.18■□□□□ 0.98
SDHDO14521 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDHDO14521 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDHDO14521 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.18■□□□□ 0.98
SDHDO14521 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.18■□□□□ 0.98
SDHDO14521 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHDO14521 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHDO14521 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHDO14521 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHDO14521 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHDO14521 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHDO14521 CA15P2-201ENST00000611168 834 ntBASIC21.17■□□□□ 0.98
SDHDO14521 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHDO14521 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SDHDO14521 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHDO14521 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHDO14521 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHDO14521 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHDO14521 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SDHDO14521 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHDO14521 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.16■□□□□ 0.98
SDHDO14521 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHDO14521 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
SDHDO14521 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHDO14521 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.16■□□□□ 0.98
SDHDO14521 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.16■□□□□ 0.98
SDHDO14521 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SDHDO14521 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.16■□□□□ 0.98
SDHDO14521 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.16■□□□□ 0.98
SDHDO14521 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHDO14521 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHDO14521 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHDO14521 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHDO14521 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.15■□□□□ 0.98
SDHDO14521 AC004687.1-201ENST00000579003 1625 ntBASIC21.15■□□□□ 0.98
SDHDO14521 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHDO14521 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHDO14521 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHDO14521 YBX1P4-201ENST00000392794 808 ntBASIC21.15■□□□□ 0.98
SDHDO14521 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.15■□□□□ 0.98
SDHDO14521 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SDHDO14521 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SDHDO14521 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SDHDO14521 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHDO14521 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHDO14521 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHDO14521 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDHDO14521 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SDHDO14521 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SDHDO14521 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.14■□□□□ 0.98
SDHDO14521 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SDHDO14521 AC021242.3-201ENST00000607598 1377 ntBASIC21.14■□□□□ 0.98
SDHDO14521 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.14■□□□□ 0.97
SDHDO14521 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.14■□□□□ 0.97
SDHDO14521 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SDHDO14521 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
SDHDO14521 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDHDO14521 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SDHDO14521 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SDHDO14521 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHDO14521 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.14■□□□□ 0.97
SDHDO14521 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHDO14521 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHDO14521 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHDO14521 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDHDO14521 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SDHDO14521 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHDO14521 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHDO14521 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.13■□□□□ 0.97
SDHDO14521 AL033527.3-201ENST00000566366 1196 ntBASIC21.13■□□□□ 0.97
SDHDO14521 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.13■□□□□ 0.97
SDHDO14521 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.13■□□□□ 0.97
SDHDO14521 AC012354.3-201ENST00000623734 483 ntBASIC21.13■□□□□ 0.97
SDHDO14521 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDHDO14521 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDHDO14521 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHDO14521 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.13■□□□□ 0.97
SDHDO14521 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHDO14521 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SDHDO14521 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms