Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TAF4O00268 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TAF4O00268 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TAF4O00268 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.31■■□□□ 1
TAF4O00268 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TAF4O00268 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.31■■□□□ 1
TAF4O00268 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TAF4O00268 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.31■■□□□ 1
TAF4O00268 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.31■■□□□ 1
TAF4O00268 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.31■■□□□ 1
TAF4O00268 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.31■■□□□ 1
TAF4O00268 BID-214ENST00000617586 542 ntTSL 5 BASIC21.31■■□□□ 1
TAF4O00268 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.31■■□□□ 1
TAF4O00268 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.31■■□□□ 1
TAF4O00268 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TAF4O00268 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
TAF4O00268 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.3■■□□□ 1
TAF4O00268 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
TAF4O00268 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TAF4O00268 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.3■■□□□ 1
TAF4O00268 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.3■■□□□ 1
TAF4O00268 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TAF4O00268 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.3■■□□□ 1
TAF4O00268 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TAF4O00268 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.3■■□□□ 1
TAF4O00268 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.3■■□□□ 1
TAF4O00268 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.3■■□□□ 1
TAF4O00268 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TAF4O00268 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.3■■□□□ 1
TAF4O00268 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.3■■□□□ 1
TAF4O00268 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.29■■□□□ 1
TAF4O00268 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.29■■□□□ 1
TAF4O00268 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
TAF4O00268 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TAF4O00268 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TAF4O00268 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.29■■□□□ 1
TAF4O00268 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.29■■□□□ 1
TAF4O00268 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.29■■□□□ 1
TAF4O00268 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.29■■□□□ 1
TAF4O00268 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.29■■□□□ 1
TAF4O00268 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.29■■□□□ 1
TAF4O00268 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
TAF4O00268 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TAF4O00268 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.28■■□□□ 1
TAF4O00268 GPX1P1-201ENST00000388829 606 ntBASIC21.28■■□□□ 1
TAF4O00268 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.28■■□□□ 1
TAF4O00268 AC142086.2-201ENST00000569753 217 ntBASIC21.28■■□□□ 1
TAF4O00268 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.28■■□□□ 1
TAF4O00268 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.28■■□□□ 1
TAF4O00268 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TAF4O00268 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TAF4O00268 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TAF4O00268 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TAF4O00268 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TAF4O00268 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.28■■□□□ 1
TAF4O00268 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TAF4O00268 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TAF4O00268 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.27■■□□□ 1
TAF4O00268 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TAF4O00268 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
TAF4O00268 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TAF4O00268 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.27■■□□□ 1
TAF4O00268 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TAF4O00268 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.27■■□□□ 1
TAF4O00268 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TAF4O00268 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.27■■□□□ 1
TAF4O00268 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.27■■□□□ 1
TAF4O00268 KRT18P6-201ENST00000555540 1265 ntBASIC21.27■■□□□ 1
TAF4O00268 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TAF4O00268 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.27■■□□□ 1
TAF4O00268 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TAF4O00268 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.27■■□□□ 1
TAF4O00268 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TAF4O00268 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TAF4O00268 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
TAF4O00268 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.27■□□□□ 0.99
TAF4O00268 AC096887.2-201ENST00000623443 1957 ntBASIC21.27■□□□□ 0.99
TAF4O00268 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TAF4O00268 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
TAF4O00268 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TAF4O00268 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
TAF4O00268 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
TAF4O00268 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.26■□□□□ 0.99
TAF4O00268 MIR4651-201ENST00000582622 73 ntBASIC21.26■□□□□ 0.99
TAF4O00268 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.26■□□□□ 0.99
TAF4O00268 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.26■□□□□ 0.99
TAF4O00268 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TAF4O00268 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TAF4O00268 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TAF4O00268 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TAF4O00268 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TAF4O00268 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TAF4O00268 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TAF4O00268 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TAF4O00268 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TAF4O00268 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TAF4O00268 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TAF4O00268 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TAF4O00268 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
TAF4O00268 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms