Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.93■□□□□ 0.78
NPIPA2E9PIF3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 AL353803.4-201ENST00000565882 1934 ntBASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 AC034268.1-201ENST00000441047 882 ntBASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPIPA2E9PIF3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 AC012414.1-201ENST00000556676 535 ntBASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NPIPA2E9PIF3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 AL031602.1-201ENST00000633169 911 ntBASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.9■□□□□ 0.78
NPIPA2E9PIF3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 AL354811.1-201ENST00000610286 706 ntBASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPIPA2E9PIF3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 AC027612.3-201ENST00000413684 1047 ntBASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 AP005435.1-201ENST00000529293 1178 ntBASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.88■□□□□ 0.77
NPIPA2E9PIF3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPIPA2E9PIF3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.86■□□□□ 0.77
NPIPA2E9PIF3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms