Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRRM4A7MD48 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SRRM4A7MD48 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SRRM4A7MD48 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.65■□□□□ 0.42
SRRM4A7MD48 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SRRM4A7MD48 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.65■□□□□ 0.42
SRRM4A7MD48 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SRRM4A7MD48 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SRRM4A7MD48 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SRRM4A7MD48 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.65■□□□□ 0.42
SRRM4A7MD48 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SRRM4A7MD48 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SRRM4A7MD48 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
SRRM4A7MD48 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 AC241377.3-202ENST00000626088 1088 ntBASIC17.64■□□□□ 0.41
SRRM4A7MD48 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 AC241585.3-202ENST00000628937 1088 ntBASIC17.64■□□□□ 0.41
SRRM4A7MD48 AC245100.8-202ENST00000629247 1058 ntBASIC17.64■□□□□ 0.41
SRRM4A7MD48 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 AC137767.1-201ENST00000602918 1920 ntBASIC17.64■□□□□ 0.41
SRRM4A7MD48 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SRRM4A7MD48 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.64■□□□□ 0.41
SRRM4A7MD48 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
SRRM4A7MD48 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 AC006455.2-201ENST00000429931 906 ntBASIC17.63■□□□□ 0.41
SRRM4A7MD48 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.63■□□□□ 0.41
SRRM4A7MD48 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.63■□□□□ 0.41
SRRM4A7MD48 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SRRM4A7MD48 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SRRM4A7MD48 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM4A7MD48 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM4A7MD48 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM4A7MD48 AC099791.2-201ENST00000605725 427 ntBASIC17.62■□□□□ 0.41
SRRM4A7MD48 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.62■□□□□ 0.41
SRRM4A7MD48 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM4A7MD48 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.62■□□□□ 0.41
SRRM4A7MD48 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM4A7MD48 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM4A7MD48 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.62■□□□□ 0.41
SRRM4A7MD48 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.62■□□□□ 0.41
SRRM4A7MD48 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SRRM4A7MD48 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM4A7MD48 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM4A7MD48 C11orf96-202ENST00000528572 1834 ntBASIC17.61■□□□□ 0.41
SRRM4A7MD48 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM4A7MD48 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM4A7MD48 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM4A7MD48 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM4A7MD48 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM4A7MD48 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM4A7MD48 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM4A7MD48 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM4A7MD48 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM4A7MD48 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM4A7MD48 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms