Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TMEM88BA6NKF7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TMEM88BA6NKF7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
TMEM88BA6NKF7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TMEM88BA6NKF7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.95■■□□□ 1.74
TMEM88BA6NKF7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TMEM88BA6NKF7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.94■■□□□ 1.74
TMEM88BA6NKF7 AC068587.7-201ENST00000641602 218 ntBASIC25.94■■□□□ 1.74
TMEM88BA6NKF7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
TMEM88BA6NKF7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMEM88BA6NKF7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.93■■□□□ 1.74
TMEM88BA6NKF7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.93■■□□□ 1.74
TMEM88BA6NKF7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMEM88BA6NKF7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TMEM88BA6NKF7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
TMEM88BA6NKF7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMEM88BA6NKF7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.92■■□□□ 1.74
TMEM88BA6NKF7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.92■■□□□ 1.74
TMEM88BA6NKF7 AC092118.2-201ENST00000613495 667 ntBASIC25.92■■□□□ 1.74
TMEM88BA6NKF7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
TMEM88BA6NKF7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TMEM88BA6NKF7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
TMEM88BA6NKF7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.91■■□□□ 1.74
TMEM88BA6NKF7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.91■■□□□ 1.74
TMEM88BA6NKF7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 UNC93B4-201ENST00000505679 747 ntBASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TMEM88BA6NKF7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMEM88BA6NKF7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TMEM88BA6NKF7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
TMEM88BA6NKF7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMEM88BA6NKF7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
TMEM88BA6NKF7 AC006058.3-201ENST00000606217 1069 ntBASIC25.89■■□□□ 1.74
TMEM88BA6NKF7 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.89■■□□□ 1.74
TMEM88BA6NKF7 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.89■■□□□ 1.74
TMEM88BA6NKF7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
TMEM88BA6NKF7 HLA-L-211ENST00000482052 1765 ntBASIC25.89■■□□□ 1.73
TMEM88BA6NKF7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 MKRN4P-201ENST00000444706 1521 ntBASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 AC144652.1-201ENST00000609974 1624 ntBASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 AP001160.3-201ENST00000601484 763 ntBASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
TMEM88BA6NKF7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 FAM210CP-201ENST00000445714 574 ntBASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 AC010141.3-201ENST00000456659 717 ntBASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 AC010536.3-201ENST00000620306 533 ntBASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TMEM88BA6NKF7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 AC128676.1-201ENST00000454392 318 ntBASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TMEM88BA6NKF7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
TMEM88BA6NKF7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms