Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRAMEF25A6NGN4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 AC241377.3-202ENST00000626088 1088 ntBASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 AC241585.3-202ENST00000628937 1088 ntBASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 AC245100.8-202ENST00000629247 1058 ntBASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF25A6NGN4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 AC144652.1-201ENST00000609974 1624 ntBASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 AC099791.2-201ENST00000605725 427 ntBASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 AC092171.4-201ENST00000609130 632 ntBASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEF25A6NGN4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 AC009086.3-201ENST00000623486 1008 ntBASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEF25A6NGN4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PRAMEF25A6NGN4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF25A6NGN4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF25A6NGN4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.52■□□□□ 0.88
PRAMEF25A6NGN4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF25A6NGN4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEF25A6NGN4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PRAMEF25A6NGN4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.52■□□□□ 0.87
PRAMEF25A6NGN4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEF25A6NGN4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 FP325331.1-202ENST00000623531 1380 ntBASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 AC092053.2-201ENST00000640557 1818 ntBASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEF25A6NGN4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 AC006455.2-201ENST00000429931 906 ntBASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 DUX4L19-201ENST00000557448 1267 ntBASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEF25A6NGN4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms