Protein–RNA interactions for Protein: A6NFQ2

TCAF2, TRPM8 channel-associated factor 2, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF2A6NFQ2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
TCAF2A6NFQ2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 AC079834.2-201ENST00000609776 1949 ntBASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TCAF2A6NFQ2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCAF2A6NFQ2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCAF2A6NFQ2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCAF2A6NFQ2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.55■■□□□ 1.2
TCAF2A6NFQ2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TCAF2A6NFQ2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.55■■□□□ 1.2
TCAF2A6NFQ2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TCAF2A6NFQ2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.55■■□□□ 1.2
TCAF2A6NFQ2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.54■■□□□ 1.2
TCAF2A6NFQ2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCAF2A6NFQ2 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCAF2A6NFQ2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCAF2A6NFQ2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TCAF2A6NFQ2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.54■■□□□ 1.2
TCAF2A6NFQ2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCAF2A6NFQ2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.53■■□□□ 1.2
TCAF2A6NFQ2 AC087239.1-201ENST00000622671 572 ntBASIC22.53■■□□□ 1.2
TCAF2A6NFQ2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TCAF2A6NFQ2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TCAF2A6NFQ2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.53■■□□□ 1.2
TCAF2A6NFQ2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TCAF2A6NFQ2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 MIR572-201ENST00000384983 95 ntBASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 MIR935-201ENST00000401179 91 ntBASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TCAF2A6NFQ2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TCAF2A6NFQ2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
TCAF2A6NFQ2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
TCAF2A6NFQ2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCAF2A6NFQ2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TCAF2A6NFQ2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.51■■□□□ 1.19
TCAF2A6NFQ2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.51■■□□□ 1.19
TCAF2A6NFQ2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.51■■□□□ 1.19
TCAF2A6NFQ2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TCAF2A6NFQ2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TCAF2A6NFQ2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 AC010141.3-201ENST00000456659 717 ntBASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 LINC01960-201ENST00000563759 1884 ntBASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TCAF2A6NFQ2 C9orf163-202ENST00000624034 2573 ntBASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.48■■□□□ 1.19
TCAF2A6NFQ2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms