Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD3L3A6NE82 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3L3A6NE82 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3L3A6NE82 IKBKGP1-201ENST00000612193 1073 ntBASIC19.41■□□□□ 0.7
MBD3L3A6NE82 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD3L3A6NE82 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
MBD3L3A6NE82 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD3L3A6NE82 DUSP8P3-201ENST00000399571 1760 ntBASIC19.41■□□□□ 0.7
MBD3L3A6NE82 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MBD3L3A6NE82 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
MBD3L3A6NE82 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3L3A6NE82 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3L3A6NE82 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3L3A6NE82 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MBD3L3A6NE82 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD3L3A6NE82 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3L3A6NE82 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD3L3A6NE82 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MBD3L3A6NE82 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.39■□□□□ 0.69
MBD3L3A6NE82 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 AL137784.2-201ENST00000607332 1000 ntBASIC19.39■□□□□ 0.69
MBD3L3A6NE82 AC092437.1-201ENST00000624794 1048 ntBASIC19.39■□□□□ 0.69
MBD3L3A6NE82 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.39■□□□□ 0.69
MBD3L3A6NE82 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MBD3L3A6NE82 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MBD3L3A6NE82 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.36■□□□□ 0.69
MBD3L3A6NE82 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
MBD3L3A6NE82 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD3L3A6NE82 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
MBD3L3A6NE82 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD3L3A6NE82 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.34■□□□□ 0.69
MBD3L3A6NE82 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD3L3A6NE82 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.34■□□□□ 0.69
MBD3L3A6NE82 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.34■□□□□ 0.69
MBD3L3A6NE82 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.34■□□□□ 0.69
MBD3L3A6NE82 RARRES2P11-201ENST00000635158 484 ntBASIC19.34■□□□□ 0.69
MBD3L3A6NE82 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.33■□□□□ 0.69
MBD3L3A6NE82 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3L3A6NE82 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.33■□□□□ 0.69
MBD3L3A6NE82 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD3L3A6NE82 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.33■□□□□ 0.68
MBD3L3A6NE82 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3L3A6NE82 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3L3A6NE82 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD3L3A6NE82 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
MBD3L3A6NE82 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L3A6NE82 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L3A6NE82 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD3L3A6NE82 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L3A6NE82 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
MBD3L3A6NE82 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD3L3A6NE82 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L3A6NE82 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms