Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.09■■□□□ 1.13
TCRBV9S1A1TA0A576 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TCRBV9S1A1TA0A576 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
TCRBV9S1A1TA0A576 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.08■■□□□ 1.13
TCRBV9S1A1TA0A576 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.08■■□□□ 1.13
TCRBV9S1A1TA0A576 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TCRBV9S1A1TA0A576 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TCRBV9S1A1TA0A576 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.08■■□□□ 1.12
TCRBV9S1A1TA0A576 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TCRBV9S1A1TA0A576 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TCRBV9S1A1TA0A576 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
TCRBV9S1A1TA0A576 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.08■■□□□ 1.12
TCRBV9S1A1TA0A576 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 FAM99A-202ENST00000538190 1989 ntBASIC22.07■■□□□ 1.12
TCRBV9S1A1TA0A576 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 AC026310.3-201ENST00000625186 2373 ntBASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV9S1A1TA0A576 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 CA15P2-201ENST00000611168 834 ntBASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.05■■□□□ 1.12
TCRBV9S1A1TA0A576 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV9S1A1TA0A576 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV9S1A1TA0A576 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
TCRBV9S1A1TA0A576 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TCRBV9S1A1TA0A576 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.04■■□□□ 1.12
TCRBV9S1A1TA0A576 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.04■■□□□ 1.12
TCRBV9S1A1TA0A576 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV9S1A1TA0A576 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV9S1A1TA0A576 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 C17orf82-201ENST00000623772 1530 ntBASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TCRBV9S1A1TA0A576 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
TCRBV9S1A1TA0A576 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TCRBV9S1A1TA0A576 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.02■■□□□ 1.12
TCRBV9S1A1TA0A576 MTDHP2-201ENST00000601468 714 ntBASIC22.02■■□□□ 1.12
TCRBV9S1A1TA0A576 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TCRBV9S1A1TA0A576 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TCRBV9S1A1TA0A576 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.11
TCRBV9S1A1TA0A576 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
TCRBV9S1A1TA0A576 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 KRT125P-201ENST00000546827 989 ntBASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 Z92544.1-202ENST00000571933 1220 ntBASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV9S1A1TA0A576 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TCRBV9S1A1TA0A576 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
TCRBV9S1A1TA0A576 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
TCRBV9S1A1TA0A576 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22■■□□□ 1.11
TCRBV9S1A1TA0A576 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22■■□□□ 1.11
TCRBV9S1A1TA0A576 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms