Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC133637.1-201ENST00000624115 1537 ntBASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 pRNA.6-201ENST00000610482 90 ntBASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 pRNA.5-201ENST00000612139 90 ntBASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 pRNA.11-201ENST00000618423 90 ntBASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 pRNA.13-201ENST00000619112 90 ntBASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC080038.3-201ENST00000623346 1952 ntBASIC15.44■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-4A0A1B0GX49 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC068587.7-201ENST00000641602 218 ntBASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-4A0A1B0GX49 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC137767.1-201ENST00000602918 1920 ntBASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC006455.2-201ENST00000429931 906 ntBASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 DUX4L19-201ENST00000557448 1267 ntBASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 AL512631.2-201ENST00000604634 923 ntBASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-4A0A1B0GX49 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms