Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TRAV22A0A0B4J277 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 CIB2-204ENST00000557846 934 ntTSL 3 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 AL157384.1-201ENST00000445995 2473 ntBASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TRAV22A0A0B4J277 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 HCG11-201ENST00000411553 5696 ntBASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
TRAV22A0A0B4J277 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 EI24-213ENST00000618552 1747 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
TRAV22A0A0B4J277 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
TRAV22A0A0B4J277 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
TRAV22A0A0B4J277 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 AL161729.1-201ENST00000604104 1402 ntBASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 STX6-204ENST00000542060 4809 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 FAM99A-202ENST00000538190 1989 ntBASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 LETM1P2-201ENST00000597330 2178 ntBASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV22A0A0B4J277 H19-210ENST00000439725 1929 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms