Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL356740.2-201ENST00000601559 647 ntBASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV4A0A0B4J268 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 AC242852.2-201ENST00000615738 1807 ntBASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 ECEL1P1-201ENST00000373592 1742 ntBASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV4A0A0B4J268 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 AC241377.3-202ENST00000626088 1088 ntBASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 AC241585.3-202ENST00000628937 1088 ntBASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 AC245100.8-202ENST00000629247 1058 ntBASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV4A0A0B4J268 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV4A0A0B4J268 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV4A0A0B4J268 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV4A0A0B4J268 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV4A0A0B4J268 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV4A0A0B4J268 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 AC004687.1-201ENST00000579003 1625 ntBASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 LINC01960-201ENST00000563759 1884 ntBASIC15.69■□□□□ 0.1
TRAV4A0A0B4J268 LINC00526-201ENST00000581067 1875 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms