Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV5A0A0B4J249 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 ABHD17AP5-201ENST00000580133 923 ntBASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 SNX5-217ENST00000606557 1087 ntBASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 AC074183.2-201ENST00000623112 922 ntBASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV5A0A0B4J249 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 LINC01529-204ENST00000636474 1715 ntBASIC16.98■□□□□ 0.31
TRAV5A0A0B4J249 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV5A0A0B4J249 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 LINC01960-201ENST00000563759 1884 ntBASIC16.96■□□□□ 0.31
TRAV5A0A0B4J249 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV5A0A0B4J249 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV5A0A0B4J249 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 AC005229.4-201ENST00000610085 2198 ntBASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV5A0A0B4J249 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV5A0A0B4J249 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV5A0A0B4J249 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms