Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.84■□□□□ 0.77
TRAV27A0A087WT01 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAV27A0A087WT01 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV27A0A087WT01 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TRAV27A0A087WT01 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV27A0A087WT01 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV27A0A087WT01 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 AC007375.3-201ENST00000600936 2314 ntBASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV27A0A087WT01 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 MIR6724-1-201ENST00000616420 92 ntBASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 MIR6724-2-201ENST00000616483 92 ntBASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 MIR6724-4-201ENST00000617390 92 ntBASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 MIR6724-3-201ENST00000622482 92 ntBASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 FBXW4P1-201ENST00000426721 2239 ntBASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV27A0A087WT01 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.8■□□□□ 0.76
TRAV27A0A087WT01 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV27A0A087WT01 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 PKD1P6-201ENST00000343738 4769 ntBASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 AL117332.1-201ENST00000622628 974 ntBASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV27A0A087WT01 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV27A0A087WT01 KRT16P3-201ENST00000439127 1283 ntBASIC19.77■□□□□ 0.76
TRAV27A0A087WT01 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV27A0A087WT01 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.77■□□□□ 0.76
TRAV27A0A087WT01 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV27A0A087WT01 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms