Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC107375.1-201ENST00000564464 2231 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1DP48730 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CSNK1DP48730 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CSNK1DP48730 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CSNK1DP48730 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1DP48730 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1DP48730 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 OBP2A-202ENST00000342114 607 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC12.86□□□□□ -0.35
CSNK1DP48730 HMGN1P4-201ENST00000419500 290 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1DP48730 PEBP1P3-201ENST00000455475 548 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1DP48730 RN7SL47P-201ENST00000488710 299 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC12.86□□□□□ -0.35
CSNK1DP48730 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC12.86□□□□□ -0.35
CSNK1DP48730 AP003040.1-201ENST00000532044 1024 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1DP48730 RN7SL602P-201ENST00000578326 324 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 SNORD55-201ENST00000581525 80 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC12.86□□□□□ -0.35
CSNK1DP48730 AC009812.1-201ENST00000605948 1059 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1DP48730 AL627230.2-201ENST00000613254 655 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CSNK1DP48730 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1DP48730 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CSNK1DP48730 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 LMCD1-202ENST00000397386 1501 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1DP48730 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 AC011481.3-201ENST00000623895 5594 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSNK1DP48730 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CSNK1DP48730 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.86□□□□□ -0.35
CSNK1DP48730 CTAGE13P-201ENST00000416709 2446 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 CICP1-201ENST00000416803 2410 ntBASIC12.86□□□□□ -0.35
CSNK1DP48730 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC12.86□□□□□ -0.35
CSNK1DP48730 CLEC17A-203ENST00000547437 2065 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1DP48730 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
CSNK1DP48730 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 APOL3-201ENST00000349314 2117 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 COX6B2-209ENST00000590900 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1DP48730 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CSNK1DP48730 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1DP48730 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CSNK1DP48730 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CSNK1DP48730 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSNK1DP48730 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC015819.3-201ENST00000624305 2674 ntBASIC12.85□□□□□ -0.35
CSNK1DP48730 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 HNRNPA1P19-201ENST00000405292 370 ntBASIC12.85□□□□□ -0.35
CSNK1DP48730 AL731577.1-201ENST00000449984 830 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC092284.1-201ENST00000511386 1289 ntBASIC12.85□□□□□ -0.35
CSNK1DP48730 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSNK1DP48730 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CSNK1DP48730 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.85□□□□□ -0.35
CSNK1DP48730 HSD3B1-201ENST00000369413 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSNK1DP48730 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CSNK1DP48730 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms